Messages by Date
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2012/07/22
Re: [galaxy-user] cuffdiff results missing
Jennifer Jackson
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2012/07/22
Re: [galaxy-user] "Jobs is waiting to run" all day on Main
Lu, Mengmeng
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2012/07/22
[galaxy-user] "Jobs is waiting to run" all day on Main
Lee Silver
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2012/07/21
[galaxy-user] cufflinks eference annotation
i b
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2012/07/20
[galaxy-user] Galaxy July 20, 2012 Distribution & News Brief
Jennifer Jackson
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2012/07/20
Re: [galaxy-user] flaking regions across TSS
Jennifer Jackson
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2012/07/20
Re: [galaxy-user] [Genome] flaking regions across TSS
Brooke Rhead
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2012/07/20
Re: [galaxy-user] Cuffconfusion
Jeremy Goecks
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2012/07/20
[galaxy-user] Cuffconfusion
i b
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2012/07/20
[galaxy-user] flaking regions across TSS
shamsher jagat
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2012/07/20
Re: [galaxy-user] Problem setting up admin in Galaxy local instance!
Daniel Blankenberg
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2012/07/20
[galaxy-user] Problem setting up admin in Galaxy local instance!
Di Nguyen
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2012/07/20
Re: [galaxy-user] cuffdiff failed
Jennifer Jackson
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2012/07/20
[galaxy-user] cuffdiff failed
i b
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2012/07/20
Re: [galaxy-user] Attempting to use parallelism in BWA
Dannon Baker
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2012/07/20
[galaxy-user] tophat output spice junction output
i b
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2012/07/20
[galaxy-user] extracting, stitching, converting MAF files: interval_maf_to_merged_fasta.py: command line usage?
Anton Kratz
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2012/07/19
Re: [galaxy-user] Error in mapping with bowtie
Jennifer Jackson
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2012/07/19
[galaxy-user] Error in mapping with bowtie
Hongkyun Kim
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2012/07/19
Re: [galaxy-user] cuffdiff results missing
Jennifer Jackson
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2012/07/19
[galaxy-user] cuffdiff results missing
i b
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2012/07/18
[galaxy-user] Galaxy intro webinar
wlathe
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2012/07/18
Re: [galaxy-user] quota limit
Jennifer Jackson
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2012/07/18
[galaxy-user] quota limit
Hongkyun Kim
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2012/07/18
[galaxy-user] Post
Rachael Sirois
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2012/07/18
[galaxy-user] from Galaxy to Megan
Judith van Bleijswijk
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2012/07/18
Re: [galaxy-user] cuffcompare outputs missing
Jennifer Jackson
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2012/07/17
[galaxy-user] GCC2012 Registration Deadline
Dave Clements
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2012/07/17
Re: [galaxy-user] Attempting to use parallelism in BWA
Scott McManus
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2012/07/17
Re: [galaxy-user] UCSC tools
Jennifer Jackson
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2012/07/17
Re: [galaxy-user] cuffdiff
Jennifer Jackson
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2012/07/17
[galaxy-user] Attempting to use parallelism in BWA
Kevin C. Dorff
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2012/07/17
[galaxy-user] UCSC tools
i b
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2012/07/17
[galaxy-user] cuffcompare outputs missing
i b
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2012/07/16
[galaxy-user] (no subject)
i b
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2012/07/16
Re: [galaxy-user] cuffdiff
Jennifer Jackson
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2012/07/16
Re: [galaxy-user] galaaxy history size (gb)
Jennifer Jackson
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2012/07/16
[galaxy-user] cuffdiff
Irene Bassano
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2012/07/16
Re: [galaxy-user] galaaxy history size (gb)
Björn Grüning
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2012/07/16
[galaxy-user] galaaxy history size (gb)
Irene Bassano
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2012/07/16
Re: [galaxy-user] cufflinks reference annotation
Jennifer Jackson
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2012/07/16
[galaxy-user] cufflinks reference annotation
Irene Bassano
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2012/07/16
[galaxy-user] sharing and publishing workflows using myExperiment
David De Roure
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2012/07/15
[galaxy-user] account
Victoria Spartacus
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2012/07/15
[galaxy-user] Generating pile-up files without spliced (intronic) regions.
Mohammad Heydarian
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2012/07/14
Re: [galaxy-user] Trackster error: indexing
Jeremy Goecks
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2012/07/13
Re: [galaxy-user] Trackster error: indexing
Jeremy Goecks
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2012/07/12
[galaxy-user] Trackster error: indexing
Nancy Au Yeung
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2012/07/12
Re: [galaxy-user] Galaxy Help!!
Jennifer Jackson
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2012/07/12
[galaxy-user] Galaxy Help!!
Robby Quinn
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2012/07/11
Re: [galaxy-user] Gene BED to codon BED not working properly
Jennifer Jackson
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2012/07/11
[galaxy-user] Gene BED to codon BED not working properly
Antony Jose
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2012/07/11
Re: [galaxy-user] Initial QC and grooming for Illumina HiSeq2000 paired end RNAseq data
Jennifer Jackson
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2012/07/11
Re: [galaxy-user] Initial QC and grooming for Illumina HiSeq2000 paired end RNAseq data
Lindsey Kelly
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2012/07/11
[galaxy-user] metagenomics question
Jennifer Jackson
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2012/07/10
Re: [galaxy-user] fetch codons and amino acid
Jennifer Jackson
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2012/07/10
[galaxy-user] Question about SICER out put
shamsher jagat
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2012/07/10
[galaxy-user] fetch codons and amino acid
bingyu19821270
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2012/07/10
[galaxy-user] Tophat
Jennifer Jackson
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2012/07/10
Re: [galaxy-user] Getting the installed data to show up in the sample files at run time
Carlos Borroto
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2012/07/09
Re: [galaxy-user] "job is waiting to run" forever
shamsher jagat
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2012/07/09
Re: [galaxy-user] "job is waiting to run" forever
Jennifer Jackson
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2012/07/09
[galaxy-user] "job is waiting to run" forever
Yehoshua Enuka
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2012/07/09
Re: [galaxy-user] Indexing files everytime - Performance Issue
Jennifer Jackson
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2012/07/09
Re: [galaxy-user] An error in reporting a tool error...
Jennifer Jackson
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2012/07/09
[galaxy-user] An error in reporting a tool error...
leah reshef
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2012/07/08
Re: [galaxy-user] Permission denied error when running fastqc
Aarti Desai
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2012/07/06
Re: [galaxy-user] HIDATA
Jennifer Jackson
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2012/07/06
Re: [galaxy-user] Data from history now showing up in fastq drop down
Aarti Desai
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2012/07/06
Re: [galaxy-user] Permission denied error when running fastqc
Aarti Desai
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2012/07/06
Re: [galaxy-user] Permission denied error when running fastqc
Aarti Desai
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2012/07/06
Re: [galaxy-user] Permission denied error when running fastqc
Luciano Cosme
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2012/07/06
Re: [galaxy-user] Data from history now showing up in fastq drop down
Luciano Cosme
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2012/07/06
[galaxy-user] HIDATA
Daiene Santos
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2012/07/06
[galaxy-user] Permission denied error when running fastqc
Aarti Desai
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2012/07/06
[galaxy-user] Data from history now showing up in fastq drop down
Aarti Desai
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2012/07/06
Re: [galaxy-user] Problem with ftp transfer of large bam files
Hans Matsson
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2012/07/05
Re: [galaxy-user] Getting reference index files in local galaxy install
Aarti Desai
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2012/07/05
Re: [galaxy-user] Getting reference index files in local galaxy install
Carlos Borroto
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2012/07/05
Re: [galaxy-user] Getting reference index files in local galaxy install
Avik Datta
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2012/07/05
Re: [galaxy-user] Getting reference index files in local galaxy install
Aarti Desai
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2012/07/04
Re: [galaxy-user] Problem with ftp transfer of large bam files
Jennifer Jackson
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2012/07/04
Re: [galaxy-user] Initial QC and grooming for Illumina HiSeq2000 paired end RNAseq data
Jennifer Jackson
-
2012/07/04
[galaxy-user] Problem with ftp transfer of large bam files
Hans Matsson
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2012/07/03
[galaxy-user] Indexing files everytime - Performance Issue
Praveen Raj Somarajan
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2012/07/03
Re: [galaxy-user] tool_path
Greg Von Kuster
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2012/07/03
Re: [galaxy-user] tool_path
Fabien Mareuil
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2012/07/03
Re: [galaxy-user] tool_path
Greg Von Kuster
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2012/07/03
[galaxy-user] tool_path
Fabien Mareuil
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2012/07/03
Re: [galaxy-user] cufflinks
Paul Orwin
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2012/07/02
[galaxy-user] GMOD Summer School application deadline
Scott Cain
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2012/07/02
Re: [galaxy-user] cufflinks
Paul Orwin
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2012/07/02
[galaxy-user] Initial QC and grooming for Illumina HiSeq2000 paired end RNAseq data
Lindsey Kelly
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2012/07/02
Re: [galaxy-user] request for a new genome (Aedes aegypti)
Jennifer Jackson
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2012/07/02
Re: [galaxy-user] cufflinks
Jennifer Jackson
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2012/07/02
[galaxy-user] request for a new genome (Aedes aegypti)
Laurence Després
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2012/07/02
[galaxy-user] cufflinks
Jennifer Jackson
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2012/07/01
[galaxy-user] sanitizer for carriage return
Katrien Bernaerts
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2012/06/28
[galaxy-user] July 2012 Galaxy Update
Dave Clements
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2012/06/28
Re: [galaxy-user] Data upload issues on Galaxy
Fatih Ozsolak
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2012/06/27
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Jennifer Jackson
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2012/06/27
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Jennifer Jackson
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2012/06/27
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Lilach Friedman
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2012/06/27
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Lilach Friedman
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2012/06/26
Re: [galaxy-user] Cannot upload file to data library
Ciara Ledero
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2012/06/26
Re: [galaxy-user] Quick question about cuff compare
Jennifer Jackson
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2012/06/26
[galaxy-user] Complete Genomics CGA Tools™� in Galaxy
Birgit Crain
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2012/06/26
Re: [galaxy-user] Quick question about cuff compare
Jennifer Jackson
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2012/06/26
[galaxy-user] Quick question about cuff compare
Jason Serviss
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2012/06/26
[galaxy-user] How to revive my account that had been marked as "deleted"?
碩璜陳
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2012/06/26
Re: [galaxy-user] Converting to index files of viral genome for running TopHAT
Jennifer Jackson
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2012/06/26
[galaxy-user] Converting to index files of viral genome for running TopHAT
shamsher jagat
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2012/06/26
Re: [galaxy-user] Cannot upload file to data library
Jennifer Jackson
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2012/06/26
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Carlos Borroto
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2012/06/26
[galaxy-user] Cannot upload file to data library
Ciara Ledero
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2012/06/25
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Jennifer Jackson
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2012/06/25
Re: [galaxy-user] Job is waiting to run for two days..
Nate Coraor
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2012/06/25
[galaxy-user] Job is waiting to run for two days..
Shanshan Pang
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2012/06/25
[galaxy-user] 2012 Systems Bioinformatics Workshop
Christopher Bare
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2012/06/25
Re: [galaxy-user] Include a data folder into Galaxy
Luciano Cosme
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2012/06/25
Re: [galaxy-user] Include a data folder into Galaxy
Nate Coraor
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2012/06/25
Re: [galaxy-user] Bowtie and BWA queue..other jobs dont
Antony Jose
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2012/06/25
Re: [galaxy-user] Bowtie and BWA queue..other jobs dont
Jennifer Jackson
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2012/06/24
Re: [galaxy-user] Include a data folder into Galaxy
Björn Grüning
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2012/06/24
[galaxy-user] Include a data folder into Galaxy
Norbert Grundmann
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2012/06/24
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Lilach Friedman
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2012/06/23
[galaxy-user] Bowtie and BWA queue..other jobs dont
Antony Jose
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2012/06/21
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Carlos Borroto
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2012/06/21
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Lilach Friedman
-
2012/06/21
Re: [galaxy-user] jobs stuck on Galaxy
Jennifer Jackson
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2012/06/21
Re: [galaxy-user] jobs stuck on Galaxy
Fatih Ozsolak
-
2012/06/20
Re: [galaxy-user] jobs stuck on Galaxy
Jennifer Jackson
-
2012/06/20
[galaxy-user] jobs stuck on Galaxy
Fatih Ozsolak
-
2012/06/20
[galaxy-user] CUFFLINK does not work!
Jennifer Jackson
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2012/06/19
Re: [galaxy-user] Tophat and Bowtie2
Luciano Cosme
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2012/06/19
[galaxy-user] Tophat and Bowtie2
Luciano Cosme
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2012/06/19
Re: [galaxy-user] generate pileup not working?
Lilach Friedman
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2012/06/18
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Church, Deanna (NIH/NLM/NCBI) [E]
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2012/06/18
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Hiram Clawson
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2012/06/18
Re: [galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Jennifer Jackson
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2012/06/18
Re: [galaxy-user] generate pileup not working?
Jennifer Jackson
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2012/06/18
Re: [galaxy-user] FTP Error 530 Sorry, the maximum number of clients (3) for this user are already connected.
Jennifer Jackson
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2012/06/18
Re: [galaxy-user] Reference genome , fasta with or without gene feature
Jennifer Jackson
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2012/06/18
Re: [galaxy-user] jobs not running on main server
Nate Coraor
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2012/06/18
Re: [galaxy-user] Galaxy main not running jobs..
Nate Coraor
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2012/06/18
[galaxy-user] Problem with Depth of Coverage on BAM files (GATK tools)
Lilach Friedman
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2012/06/16
[galaxy-user] Galaxy main not running jobs..
Jayaraman, Shyam
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2012/06/16
[galaxy-user] jobs not running on main server
Jacob Musser
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2012/06/15
Re: [galaxy-user] FTP down?
Nate Coraor
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2012/06/14
[galaxy-user] GMOD Summer School now accepting applications
Scott Cain
-
2012/06/14
[galaxy-user] generate pileup not working?
Lilach Friedman
-
2012/06/14
Re: [galaxy-user] Galaxy in AWS AMI
Lilach Friedman
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2012/06/14
[galaxy-user] FTP Error 530 Sorry, the maximum number of clients (3) for this user are already connected.
Christopher M. Weber
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2012/06/14
Re: [galaxy-user] Galaxy in AWS AMI
Dannon Baker
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2012/06/14
[galaxy-user] FTP down?
John Clayton
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2012/06/14
[galaxy-user] Page edition bug
Felix Homa
-
2012/06/14
Re: [galaxy-user] Galaxy Reference Genome
Loraine, Ann
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2012/06/14
Re: [galaxy-user] upload problem
Scott McManus
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2012/06/14
[galaxy-user] Reference genome , fasta with or without gene feature
Ateequr Rehman
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2012/06/13
[galaxy-user] upload problem
sujata dhar
-
2012/06/13
Re: [galaxy-user] Galaxy Reference Genome
Jennifer Jackson
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2012/06/13
Re: [galaxy-user] Galaxy in AWS AMI
Enis Afgan
-
2012/06/13
Re: [galaxy-user] Galaxy Reference Genome
Jennifer Jackson
-
2012/06/13
Re: [galaxy-user] Galaxy in AWS AMI
Lilach Friedman
-
2012/06/13
Re: [galaxy-user] regarding Fusion transcript detection
Jennifer Jackson
-
2012/06/13
[galaxy-user] Galaxy Reference Genome
Kristen Roop
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2012/06/12
Re: [galaxy-user] stdout and stderr files
Poornima Pochana
-
2012/06/12
[galaxy-user] regarding Fusion transcript detection
Amit Pande
-
2012/06/11
Re: [galaxy-user] stdout and stderr files
Scott McManus
-
2012/06/10
[galaxy-user] GCC2012 Early Registration ENDS THIS MONDAY JUNE 11
Dave Clements
-
2012/06/09
[galaxy-user] stdout and stderr files
Poornima Pochana
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2012/06/08
Re: [galaxy-user] requirements
Jennifer Jackson
-
2012/06/08
[galaxy-user] requirements
McGowan, Kevin M.
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2012/06/08
[galaxy-user] Question about Galaxy
Jennifer Jackson
-
2012/06/07
[galaxy-user] Updates to CloudMan
Enis Afgan
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2012/06/07
Re: [galaxy-user] Cufflinks GTF
Jennifer Jackson
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2012/06/06
[galaxy-user] Cufflinks GTF
Richard Linchangco
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2012/06/06
Re: [galaxy-user] Sequences are not currently available for the specified build.
Jennifer Jackson
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2012/06/06
Re: [galaxy-user] problems with the uploading
Luciano Cosme
-
2012/06/06
Re: [galaxy-user] problems with the uploading
Jennifer Jackson
-
2012/06/06
Re: [galaxy-user] Sequences are not currently available for the specified build.
Jennifer Jackson
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2012/06/06
[galaxy-user] problems with the uploading
Monica BALLARINO
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2012/06/05
Re: [galaxy-user] Sequences are not currently available for the specified build.
Richard Linchangco
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2012/06/04
Re: [galaxy-user] Create VCF file from samtools pile-up
Jennifer Jackson
-
2012/06/04
Re: [galaxy-user] (no subject)
Jennifer Jackson
-
2012/06/04
Re: [galaxy-user] (no subject)
Jennifer Jackson
-
2012/06/04
[galaxy-user] GCC2012 Early Registration ends in 1 week
Dave Clements
-
2012/06/04
[galaxy-user] email database
Roger Liu
-
2012/06/04
[galaxy-user] ChIP-seq data analysis question
cjt5
-
2012/06/01
[galaxy-user] Search Galaxy Problems-solutions archive
Jennifer Jackson
-
2012/06/01
Re: [galaxy-user] Cufflinks error with illumina igenome .GTF for annnotation
Jennifer Jackson
-
2012/06/01
[galaxy-user] Cufflinks error with illumina igenome .GTF for annnotation
Sarah Elisabeth Ewald
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2012/06/01
[galaxy-user] June 2012 Galaxy Update
Dave Clements
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2012/06/01
Re: [galaxy-user] Inconsistency between cufflinks and cuffdiff. This is killing me.
Jeremy Goecks
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2012/06/01
[galaxy-user] Inconsistency between cufflinks and cuffdiff. This is killing me.
Jia Meng
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2012/05/31
Re: [galaxy-user] galaxy cloud not setting up properly
Enis Afgan
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2012/05/31
Re: [galaxy-user] Question about fetching sequence from genome
Jennifer Jackson
-
2012/05/31
Re: [galaxy-user] How to control registration
Zeeshan Ali Shah
-
2012/05/31
Re: [galaxy-user] How to control registration
Zeeshan Ali Shah
-
2012/05/31
Re: [galaxy-user] How to control registration
Jorrit Boekel