Alicia, Some relevant details usually make it easier for list members to help you - please see http://wiki.g2.bx.psu.edu/Support#Public_mailing_list_Q_.26_A_discussions
Did you load the offending tool from a toolshed or is it a tool wrapper you wrote yourself? If the latter, I have two suggestions: 1) Search paster.log for your tool name and make sure it got correctly loaded when you restarted Galaxy - xml syntax errors like misplaced < characters will break the tool loading process. 2) if the log shows that it loaded, make sure you refresh the tool frame in your browser after restarting Galaxy - eg clicking the "analyse data" tab will get rid of the old cached copy. On Sat, Oct 6, 2012 at 10:02 AM, Alicia R. Pérez-Porro <[email protected]> wrote: > Hi all, > > Recently i installed RSEM into Galaxy. > The problem is that now i cannot find the tool when i open "my" galaxy in my > computer. I checked and rsem folder is inside the tool folder. > Any suggestions? > > Thanks, > Alicia. > > > > > > -- > Alicia R. Pérez-Porro > PhD student > > Giribet lab > Department of Organismic and Evolutionary Biology > MCZ labs > Harvard University > 26 Oxford St, Cambridge MA 02138 > phone: +1 617-496-5308 > fax: +1 617-495-5667 > www.oeb.harvard.edu/faculty/giribet/ > > Department of Marine Ecology > Center for Advanced Studies of Blanes (CEAB-CSIC) > C/Accés Cala St. Francesc 14 > 17300 Blanes, Girona, SPAIN > phone: +34 972 336 101 > fax: +34 972 337 806 > www.ceab.csic.es > > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ -- Ross Lazarus MBBS MPH; Head, Medical Bioinformatics, BakerIDI; Tel: +61 385321444 http://scholar.google.com/citations?hl=en&user=UCUuEM4AAAAJ ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
