Hi Yan, have a look at the blast2GO wrapper in the toolshed. If you already have gene-ids you can download the GO in an appropriate format and intersect with your ids.
Hope that works, Bjoern > Hi everyone, > > > > I got a list of differentially expressed genes from my RNA-seq data. > Is there a tool on Galaxy that I can do the GO enrichment analysis for > the differentially expressed genes? Any help or suggestion is highly > appreciated! > > > > Best regards, > > Yan > > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
