NGS jobs are experiencing significant delays at this time due to load -- we're 
looking into it.  Regarding the local install I'd have to recommend pinging the 
administrator on site there -- they should be able to help out.

-Dannon

On Nov 8, 2012, at 10:44 AM, Larry Reiter <lrei...@uthsc.edu> wrote:

> It looks like both the main server and our local install are frozen.  Nothing 
> has run since we started yesterday at about 11:30am.  Anybody know why?
> 
> LTR
> 
> On 11/7/12 4:05 PM, Dannon Baker wrote:
>> Main will complete the jobs eventually, though obviously that's not 
>> particularly useful in the context of your class today.  How is your cloud 
>> instance set up?  Cloud or local instances should be the best and most 
>> reliable option for teaching with and I'd definitely like to figure out why 
>> yours failed.
>> 
>> -Dannon
>> 
>> 
>> On Nov 7, 2012, at 3:57 PM, Larry Reiter 
>> <lrei...@uthsc.edu>
>>  wrote:
>> 
>> 
>>> Dannon,
>>> 
>>> Thanks for getting back to me.  Both the local cloud install and the main 
>>> server are frozen.  Well, not exactly frozen.  I can still rename or delete 
>>> jobs, etc.  I can even switch histories and such, but I can't get it to run 
>>> even simple jobs - like taking a demo file and running Fastq Groomer.  I 
>>> realize the load is high today on the main server, but we were able to get 
>>> jobs to run right up until we tried to MAP using Bowtie for Illumina.  At 
>>> that point, all members of the class - and me - could not go any further 
>>> (i.e. jobs are grey and never start to run).  Class ended almost three 
>>> hours ago.
>>> 
>>> Does this help?
>>> 
>>> LTR
>>> 
>>> On 11/7/12 2:52 PM, Dannon Baker wrote:
>>> 
>>>> Can you describe more about what is broken with your cloud install? 
>>>> 
>>>> Regarding main - the server has been under heavy load today and, while it 
>>>> shouldn't remain frozen, might be slow to dispatch and, depending on the 
>>>> type, execute) jobs.
>>>> 
>>>> -Dannon
>>>> 
>>>> On Nov 7, 2012, at 1:12 PM, Larry Reiter 
>>>> 
>>>> <lrei...@uthsc.edu>
>>>> 
>>>>  wrote:
>>>> 
>>>> 
>>>> 
>>>>> Tried to teach a class today on ChipSeq analysis, but the local Cloud 
>>>>> install is broken and then the Penn server froze on us.  Is there 
>>>>> something I should know?
>>>>> 
>>>>> LTR
>>>>> 
>>>>> -- 
>>>>> Lawrence T. Reiter, Ph.D.
>>>>> Associate Professor, Department of Neurology
>>>>> 855 Monroe Ave., Link 415
>>>>> Memphis, TN 38163
>>>>> 
>>>>> 901-448-2635 (Office)
>>>>> 901-448-7440 (FAX)
>>>>> 901-448-7443 (Lab)
>>>>> e-mail: 
>>>>> 
>>>>> lrei...@uthsc.edu
>>>>> 
>>>>> 
>>>>> 
>>>>> Reiter Faculty Page
>>>>> Reiter Citation Index
>>>>> Tooth Study
>>>>> ___________________________________________________________
>>>>> The Galaxy User list should be used for the discussion of
>>>>> Galaxy analysis and other features on the public server
>>>>> at usegalaxy.org.  Please keep all replies on the list by
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>>>>> use the Galaxy Development list:
>>>>> 
>>>>>  
>>>>> 
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>>>>> 
>>>>> 
>>>>> 
>>>>> To manage your subscriptions to this and other Galaxy lists,
>>>>> please use the interface at:
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>>>>>  
>>>>> 
>>>>> http://lists.bx.psu.edu/
>>> 
>>> -- 
>>> Lawrence T. Reiter, Ph.D.
>>> Associate Professor, Department of Neurology
>>> 855 Monroe Ave., Link 415
>>> Memphis, TN 38163
>>> 
>>> 901-448-2635 (Office)
>>> 901-448-7440 (FAX)
>>> 901-448-7443 (Lab)
>>> e-mail: 
>>> lrei...@uthsc.edu
>>> 
>>> 
>>> Reiter Faculty Page
>>> Reiter Citation Index
>>> Tooth Study
>>> 
> 
> 
> -- 
> Lawrence T. Reiter, Ph.D.
> Associate Professor, Department of Neurology
> 855 Monroe Ave., Link 415
> Memphis, TN 38163
> 
> 901-448-2635 (Office)
> 901-448-1160 (FAX)
> 901-448-7443 (Lab)
> e-mail: lrei...@uthsc.edu
> 
> Reiter Faculty Page
> Reiter Citation Index

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