Dannon,
Maybe you can, but not through me. I'm just a lowly user and
biologist. You would have to contact the guy who did the installation
and runs the server: Lei Yan (leiyan2...@gmail.com)
I would think he would be receptive to some help, so you should mail him.
LTR
On 11/7/12 4:05 PM, Dannon Baker wrote:
Main will complete the jobs eventually, though obviously that's not
particularly useful in the context of your class today. How is your cloud
instance set up? Cloud or local instances should be the best and most reliable
option for teaching with and I'd definitely like to figure out why yours failed.
-Dannon
On Nov 7, 2012, at 3:57 PM, Larry Reiter <lrei...@uthsc.edu> wrote:
Dannon,
Thanks for getting back to me. Both the local cloud install and the main
server are frozen. Well, not exactly frozen. I can still rename or delete
jobs, etc. I can even switch histories and such, but I can't get it to run
even simple jobs - like taking a demo file and running Fastq Groomer. I
realize the load is high today on the main server, but we were able to get jobs
to run right up until we tried to MAP using Bowtie for Illumina. At that
point, all members of the class - and me - could not go any further (i.e. jobs
are grey and never start to run). Class ended almost three hours ago.
Does this help?
LTR
On 11/7/12 2:52 PM, Dannon Baker wrote:
Can you describe more about what is broken with your cloud install?
Regarding main - the server has been under heavy load today and, while it
shouldn't remain frozen, might be slow to dispatch and, depending on the type,
execute) jobs.
-Dannon
On Nov 7, 2012, at 1:12 PM, Larry Reiter
<lrei...@uthsc.edu>
wrote:
Tried to teach a class today on ChipSeq analysis, but the local Cloud install
is broken and then the Penn server froze on us. Is there something I should
know?
LTR
--
Lawrence T. Reiter, Ph.D.
Associate Professor, Department of Neurology
855 Monroe Ave., Link 415
Memphis, TN 38163
901-448-2635 (Office)
901-448-7440 (FAX)
901-448-7443 (Lab)
e-mail:
lrei...@uthsc.edu
Reiter Faculty Page
Reiter Citation Index
Tooth Study
___________________________________________________________
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--
Lawrence T. Reiter, Ph.D.
Associate Professor, Department of Neurology
855 Monroe Ave., Link 415
Memphis, TN 38163
901-448-2635 (Office)
901-448-7440 (FAX)
901-448-7443 (Lab)
e-mail: lrei...@uthsc.edu
Reiter Faculty Page
Reiter Citation Index
Tooth Study
--
Lawrence T. Reiter, Ph.D.
Associate Professor, Department of Neurology
855 Monroe Ave., Link 415
Memphis, TN 38163
901-448-2635 (Office)
901-448-7440 (FAX)
901-448-7443 (Lab)
e-mail: lrei...@uthsc.edu
Reiter Faculty Page <http://www.uthsc.edu/neuroscience/faculty/L_Reiter.php>
Reiter Citation Index
<http://scholar.google.com/citations?user=-kaQJ14AAAAJ&hl=en>
Tooth Study <http://tinyurl.com/88f688l>
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
