Hi,
I have aGalaxy toolwith some R code which is split up into a few files,
which are loaded by a "master R script", which orcestrates and executes
the whole thing.
I realize that when the master script ("run.R" in my case) is run, it
will not find the other files, since it is itself moved away to a
temporary working directory (something like
".../galaxy/database/job_working_directory/000/165").
Is there any "standard way" of dealing with this, any special toolconfig
syntax etc? ... or do I have to just hard code the absolute paths to the
extra files in my script? :|
Best Regards
// Samuel
--
Developer at SNIC-UPPMAX www.uppmax.uu.se
Developer at Dept of Pharm Biosciences www.farmbio.uu.se
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