Messages by Date
-
2013/05/07
Re: [galaxy-user] problems with Tophat
Jennifer Jackson
-
2013/05/07
Re: [galaxy-user] Error in Tophat
Jennifer Jackson
-
2013/05/07
[galaxy-user] problems with Tophat
Elwood Linney
-
2013/05/07
Re: [galaxy-user] Downloading files via FTP
Geert Vandeweyer
-
2013/05/07
Re: [galaxy-user] Downloading files via FTP
Dannon Baker
-
2013/05/07
[galaxy-user] Error in Tophat
lilach noy
-
2013/05/07
[galaxy-user] Downloading files via FTP
lilach noy
-
2013/05/06
Re: [galaxy-user] purging deleted histories
Jennifer Jackson
-
2013/05/06
[galaxy-user] purging deleted histories
Suzie Hight
-
2013/05/06
Re: [galaxy-user] server error query
Jennifer Jackson
-
2013/05/06
[galaxy-user] server error query
shreya ghosh
-
2013/05/06
[galaxy-user] May 2013 Galaxy Update
Dave Clements
-
2013/05/01
Re: [galaxy-user] Map with BWA for Illumina is hung
Casey,Richard
-
2013/05/01
Re: [galaxy-user] trimming illumina reads from 3' without considering quality score
Jennifer Jackson
-
2013/05/01
Re: [galaxy-user] Map with BWA for Illumina is hung
Jennifer Jackson
-
2013/05/01
Re: [galaxy-user] Tophat for Illumina is not running
Jennifer Jackson
-
2013/05/01
[galaxy-user] trimming illumina reads from 3' without considering quality score
Mathew Bunj
-
2013/04/30
Re: [galaxy-user] Can Galaxy help with Comparative Genomics?
Joshua Burkhart
-
2013/04/30
[galaxy-user] Map with BWA for Illumina is hung
Casey,Richard
-
2013/04/30
[galaxy-user] Tophat for Illumina is not running
lilach noy
-
2013/04/29
[galaxy-user] GFF parsing with biopython
Mic
-
2013/04/29
Re: [galaxy-user] List of genomes
Jennifer Jackson
-
2013/04/29
[galaxy-user] List of genomes
YBao
-
2013/04/29
Re: [galaxy-user] GenBank database files
Peter Cock
-
2013/04/28
Re: [galaxy-user] Can Galaxy help with Comparative Genomics?
Jennifer Jackson
-
2013/04/28
Re: [galaxy-user] Gain sequences after mapping reads to a reference genome
Jennifer Jackson
-
2013/04/28
[galaxy-user] gff installation failed with easy_install
Mic
-
2013/04/28
[galaxy-user] Can Galaxy help with Comparative Genomics?
Joshua Burkhart [uoregon.edu]
-
2013/04/28
Re: [galaxy-user] GenBank database files
Peter Cock
-
2013/04/28
[galaxy-user] Regarding combining several txt files and producing one fastq file
Jennifer Jackson
-
2013/04/28
[galaxy-user] GenBank database files
Mike Dyall-Smith
-
2013/04/27
[galaxy-user] Gain sequences after mapping reads to a reference genome
zwp112358
-
2013/04/26
Re: [galaxy-user] problem with the public Main Galaxy server
Jennifer Jackson
-
2013/04/26
Re: [galaxy-user] Barcode splitter on paired end Illumina reads
Jennifer Jackson
-
2013/04/26
Re: [galaxy-user] Problems Adding a Custom Build
Jennifer Jackson
-
2013/04/26
[galaxy-user] problem with the public Main Galaxy server
Ianiri, Giuseppe
-
2013/04/25
Re: [galaxy-user] Join, Subtract and Group PLUS large GOA files
Jennifer Jackson
-
2013/04/25
Re: [galaxy-user] ImportError: Unable to run arch-specific checks
James Taylor
-
2013/04/25
Re: [galaxy-user] [galaxy-dev] Teaching using Galaxy
David Joly
-
2013/04/25
Re: [galaxy-user] Join, Subtract and Group PLUS large GOA files
Colleen Burge
-
2013/04/25
Re: [galaxy-user] [galaxy-dev] Teaching using Galaxy
Hans-Rudolf Hotz
-
2013/04/25
Re: [galaxy-user] ImportError: Unable to run arch-specific checks
Shun Liang
-
2013/04/24
Re: [galaxy-user] [galaxy-dev] Teaching using Galaxy
Dave Clements
-
2013/04/24
Re: [galaxy-user] [galaxy-dev] Teaching using Galaxy
David Joly
-
2013/04/24
Re: [galaxy-user] [galaxy-dev] Teaching using Galaxy
Dave Clements
-
2013/04/24
[galaxy-user] Barcode splitter on paired end Illumina reads
Veranja Liyanapathirana
-
2013/04/24
[galaxy-user] Problems Adding a Custom Build
Mackenzie Gavery
-
2013/04/24
Re: [galaxy-user] analysing pooled data with FreeBayes
Jennifer Jackson
-
2013/04/24
Re: [galaxy-user] preprocessing gDNA illumina paired end data for mapping/snp calling
Jennifer Jackson
-
2013/04/24
[galaxy-user] ImportError: Unable to run arch-specific checks
Shun Liang
-
2013/04/24
[galaxy-user] preprocessing gDNA illumina paired end data for mapping/snp calling
Timothy Brennan
-
2013/04/23
[galaxy-user] Uses for Galaxy
Priya Bhatt
-
2013/04/23
Re: [galaxy-user] trouble using bcf tools.
Jennifer Jackson
-
2013/04/23
Re: [galaxy-user] problem with the joining of two interval dataset
Jennifer Jackson
-
2013/04/23
Re: [galaxy-user] Join, Subtract and Group PLUS large GOA files
Jennifer Jackson
-
2013/04/23
[galaxy-user] Join, Subtract and Group PLUS large GOA files
Colleen Burge
-
2013/04/22
[galaxy-user] Teaching using Galaxy
David Joly
-
2013/04/22
Re: [galaxy-user] Jobs waiting to run over a week
Jennifer Jackson
-
2013/04/22
[galaxy-user] Jobs waiting to run over a week
Benard Lab
-
2013/04/20
[galaxy-user] problem with the joining of two interval dataset
Milad Bastami
-
2013/04/19
Re: [galaxy-user] Regarding a cuffdiff output
Jennifer Hillman-Jackson
-
2013/04/19
Re: [galaxy-user] Question about scripting
Nate Coraor
-
2013/04/19
[galaxy-user] Question about scripting
leconte
-
2013/04/18
[galaxy-user] analysing pooled data with FreeBayes
Nicola Smith
-
2013/04/17
[galaxy-user] Fwd: [Gmod-announce] 2013 GMOD Summer School: Apply now!
Dave Clements
-
2013/04/17
Re: [galaxy-user] fastq quality trimmer
Dannon Baker
-
2013/04/17
Re: [galaxy-user] fastq quality trimmer
Jennifer Jackson
-
2013/04/17
[galaxy-user] fastq quality trimmer
Tomaz Rijavec
-
2013/04/16
Re: [galaxy-user] Put an apache password on galaxy?
Lee Katz
-
2013/04/16
Re: [galaxy-user] cufflink workflow
Jennifer Jackson
-
2013/04/16
Re: [galaxy-user] Metagenome Analysis
Jennifer Jackson
-
2013/04/16
[galaxy-user] cufflink workflow
Ianiri, Giuseppe
-
2013/04/15
[galaxy-user] Metagenome Analysis
Mike Dyall-Smith
-
2013/04/15
Re: [galaxy-user] FW: problem using Depth of Coverage (GATK)
Jennifer Jackson
-
2013/04/15
Re: [galaxy-user] Put an apache password on galaxy?
Jennifer Jackson
-
2013/04/15
Re: [galaxy-user] Which "Library Type" should I use for single-end reads
Jennifer Jackson
-
2013/04/15
[galaxy-user] Put an apache password on galaxy?
Lee Katz
-
2013/04/15
[galaxy-user] Which "Library Type" should I use for single-end reads
Du, Jianguang
-
2013/04/14
[galaxy-user] Barcode splitter on paired end reads
Veranja Liyanapathirana
-
2013/04/12
Re: [galaxy-user] Tool for changes in bedgraph files
Jennifer Jackson
-
2013/04/12
Re: [galaxy-user] Prolonged - Job waiting to run
Jennifer Jackson
-
2013/04/12
Re: [galaxy-user] min alignement count
Jennifer Jackson
-
2013/04/12
[galaxy-user] problem with GenomeSpace Exporter
Gema Sanz Santos
-
2013/04/12
[galaxy-user] Prolonged - Job waiting to run
Veranja Liyanapathirana
-
2013/04/12
[galaxy-user] min alignement count
Davide Degli Esposti
-
2013/04/11
Re: [galaxy-user] raw count of genes
Björn Grüning
-
2013/04/11
Re: [galaxy-user] Internal Server Error and slow to refresh History
Jennifer Jackson
-
2013/04/11
[galaxy-user] raw count of genes
Els Willems
-
2013/04/11
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Du, Jianguang
-
2013/04/11
[galaxy-user] Tool for changes in bedgraph files
Kristin Denise Kernohan
-
2013/04/10
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Jeremy Goecks
-
2013/04/10
Re: [galaxy-user] merging fastq files
Jennifer Jackson
-
2013/04/10
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Jeremy Goecks
-
2013/04/10
Re: [galaxy-user] merging fastq files
Thompson, Andrew
-
2013/04/10
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Du, Jianguang
-
2013/04/10
Re: [galaxy-user] Parameters for merging BAM files
Du, Jianguang
-
2013/04/10
Re: [galaxy-user] Barcode splitter on paired end data
Veranja Liyanapathirana
-
2013/04/09
Re: [galaxy-user] Barcode splitter on paired end data
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] problem using Depth of Coverage (GATK)
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] files upload helo
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] tophat job help
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] Parameters for merging BAM files
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Jeremy Goecks
-
2013/04/09
Re: [galaxy-user] Extracting sequences for transcripts from reference genome
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Du, Jianguang
-
2013/04/09
Re: [galaxy-user] merging fastq files
Jennifer Jackson
-
2013/04/09
Re: [galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Jeremy Goecks
-
2013/04/08
[galaxy-user] GCC2013 Talk Abstract Submission closes this Friday
Dave Clements
-
2013/04/08
[galaxy-user] Are reads of 36nt in length long enough to accutatly map on splicing junctions?
Du, Jianguang
-
2013/04/08
[galaxy-user] Barcode splitter on paired end data
Veranja Liyanapathirana
-
2013/04/08
Re: [galaxy-user] merging fastq files
Thompson, Andrew
-
2013/04/08
[galaxy-user] Extracting sequences for transcripts from reference genome
Lizex Husselmann
-
2013/04/08
Re: [galaxy-user] Regarding a cuffdiff output
Jennifer Jackson
-
2013/04/08
Re: [galaxy-user] merging fastq files
Jennifer Jackson
-
2013/04/08
Re: [galaxy-user] FW: Change format with "edit attributes"
Jennifer Jackson
-
2013/04/08
Re: [galaxy-user] Peak Overlap Analysis, allowing space between "overlapping" peaks
Jennifer Jackson
-
2013/04/07
[galaxy-user] problem using Depth of Coverage (GATK)
Gema Sanz
-
2013/04/06
[galaxy-user] files upload helo
Dipanjana Datta De
-
2013/04/06
[galaxy-user] Error in creating Depth of Coverage files after Bowtie for Illumina alignment
Veranja Liyanapathirana
-
2013/04/05
[galaxy-user] tophat job help
Dipanjana Datta De
-
2013/04/05
Re: [galaxy-user] (no subject)
Jeremy Goecks
-
2013/04/05
[galaxy-user] Parameters for merging BAM files
Du, Jianguang
-
2013/04/05
Re: [galaxy-user] FastQC Issue with per base nucleotide quality graph
Anton Nekrutenko
-
2013/04/05
[galaxy-user] (no subject)
Davide Degli Esposti
-
2013/04/05
[galaxy-user] merging fastq files
Thompson, Andrew
-
2013/04/04
[galaxy-user] Call for papers for a special GCC2013 and Galaxy series in GigaScience
Dave Clements
-
2013/04/04
[galaxy-user] Extracting sequences for transcripts from reference genome
Lizex Husselmann
-
2013/04/03
[galaxy-user] Using segments of sequences as a reference genome - Bowtie for Illumina
Veranja Liyanapathirana
-
2013/04/03
Re: [galaxy-user] Phyloviz and problem viewing nexus and newick files
James Taylor
-
2013/04/03
Re: [galaxy-user] Change format with "edit attributes"
Carlos Borroto
-
2013/04/03
[galaxy-user] Phyloviz and problem viewing nexus and newick files
Yvan Le Bras
-
2013/04/03
[galaxy-user] Regarding a cuffdiff output
Yona Kim
-
2013/04/03
Re: [galaxy-user] Change format with "edit attributes"
Daniel Blankenberg
-
2013/04/03
[galaxy-user] FW: Change format with "edit attributes"
Gema Sanz Santos
-
2013/04/03
Re: [galaxy-user] Change format with "edit attributes"
Peter Cock
-
2013/04/03
[galaxy-user] Change format with "edit attributes"
Gema Sanz Santos
-
2013/04/01
[galaxy-user] April 2013 Galaxy Update
Dave Clements
-
2013/04/01
[galaxy-user] Galaxy April 1, 2013 Distribution
Jennifer Jackson
-
2013/04/01
[galaxy-user] GCC2013 Oral Presentation Abstract Submission Closes 12 April
Dave Clements
-
2013/03/31
[galaxy-user] Genomic Intervals Coverage: csv of 2nd dataset Identifiers
Kumar, Charu Gupta
-
2013/03/29
[galaxy-user] Peak Overlap Analysis, allowing space between "overlapping" peaks
Eric Van Otterloo
-
2013/03/28
Re: [galaxy-user] Uploading Illumina BAM files in Galaxy
Jennifer Jackson
-
2013/03/28
[galaxy-user] Uploading Illumina BAM files in Galaxy
Priya Bhatt
-
2013/03/28
Re: [galaxy-user] downloads MAF files
Jennifer Jackson
-
2013/03/28
Re: [galaxy-user] FastQC Issue with per base nucleotide quality graph
Kreshnik B Ahmeti
-
2013/03/28
Re: [galaxy-user] FastQC Issue with per base nucleotide quality graph
Loraine, Ann
-
2013/03/28
[galaxy-user] downloads MAF files
Navin Rustagi
-
2013/03/28
[galaxy-user] FastQC Issue with per base nucleotide quality graph
Tan, Justin
-
2013/03/27
Re: [galaxy-user] Depth command in SAM tools
Jennifer Jackson
-
2013/03/27
Re: [galaxy-user] is there size limit of dataset for running Tophat?
Jennifer Jackson
-
2013/03/27
Re: [galaxy-user] glitch in .wig visualization in trackster?
Michael Axtell
-
2013/03/27
[galaxy-user] Internal Server Error and slow to refresh History
Gene Genome
-
2013/03/27
[galaxy-user] is there size limit of dataset for running Tophat?
Du, Jianguang
-
2013/03/27
Re: [galaxy-user] glitch in .wig visualization in trackster?
James Taylor
-
2013/03/27
Re: [galaxy-user] Finding Indels
Jennifer Jackson
-
2013/03/27
Re: [galaxy-user] Question about tool
Jennifer Jackson
-
2013/03/26
Re: [galaxy-user] History items remain pending (grey color)
Priya Bhatt
-
2013/03/26
Re: [galaxy-user] History items remain pending (grey color)
Jennifer Jackson
-
2013/03/26
Re: [galaxy-user] Could not find the refseq from database list
Jennifer Jackson
-
2013/03/26
[galaxy-user] hello Newbie questions about galaxy and clustering
leconte
-
2013/03/26
[galaxy-user] Could not find the refseq from database list
xiaogeng Feng
-
2013/03/26
Re: [galaxy-user] [Gmod-gbrowse] Last day for early registration for GMOD 2013
Amelia Ireland
-
2013/03/26
Re: [galaxy-user] History items remain pending (grey color)
graham etherington (TSL)
-
2013/03/25
[galaxy-user] History items remain pending (grey color)
Priya Bhatt
-
2013/03/25
Re: [galaxy-user] software post alignment
Jeremy Goecks
-
2013/03/25
[galaxy-user] Question about tool
Sandra Santos
-
2013/03/22
[galaxy-user] software post alignment
Ianiri, Giuseppe
-
2013/03/22
[galaxy-user] Finding Indels
Irene Kaplow
-
2013/03/22
Re: [galaxy-user] glitch in .wig visualization in trackster?
Jennifer Jackson
-
2013/03/22
[galaxy-user] glitch in .wig visualization in trackster?
Michael Axtell
-
2013/03/21
Re: [galaxy-user] Using BWA to map without any mismathces
Jennifer Jackson
-
2013/03/21
Re: [galaxy-user] Do I need to specify the file format when I upload datasets using FTP method?
Jennifer Jackson
-
2013/03/21
[galaxy-user] Do I need to specify the file format when I upload datasets using FTP method?
Du, Jianguang
-
2013/03/20
Re: [galaxy-user] barcode splitter files web based
Jennifer Jackson
-
2013/03/20
[galaxy-user] Last day for early registration for GMOD 2013
Scott Cain
-
2013/03/20
[galaxy-user] barcode splitter files web based
Ann Holtz-Morris, M.S.
-
2013/03/20
Re: [galaxy-user] Galaxy Main jobs not running?
Nicole Cloonan
-
2013/03/20
Re: [galaxy-user] Galaxy Main jobs not running?
Jennifer Jackson
-
2013/03/19
[galaxy-user] Galaxy Main jobs not running?
Nicole Cloonan
-
2013/03/19
Re: [galaxy-user] Problem with workflow step ordering
Jennifer Jackson
-
2013/03/19
Re: [galaxy-user] Server error during custom build on main
Jennifer Jackson
-
2013/03/19
Re: [galaxy-user] Server error during custom build on main
Michael Axtell
-
2013/03/18
Re: [galaxy-user] Server error during custom build on main
Jennifer Jackson
-
2013/03/18
[galaxy-user] Server error during custom build on main
Michael Axtell
-
2013/03/18
Re: [galaxy-user] Medicago and Soybean Genome in Galaxy
Jennifer Jackson
-
2013/03/18
Re: [galaxy-user] Importing archived Histories
Jeremy Goecks
-
2013/03/17
[galaxy-user] Medicago and Soybean Genome in Galaxy
Oswaldo Lopez
-
2013/03/17
[galaxy-user] Importing archived Histories
Clare Sloggett
-
2013/03/15
Re: [galaxy-user] Cuffdiff statistical calculations are inconsistent?
Jeremy Goecks
-
2013/03/15
[galaxy-user] Depth command in SAM tools
Els Willems
-
2013/03/15
[galaxy-user] Problem with workflow step ordering
Ian Donaldson
-
2013/03/15
[galaxy-user] Early registration for GMOD meeting closes in one week
Scott Cain
-
2013/03/14
Re: [galaxy-user] How to connect to private instance of galaxy from another computer
James Taylor
-
2013/03/13
Re: [galaxy-user] Cuffdiff statistical calculations are inconsistent?
Mohammad Heydarian
-
2013/03/13
[galaxy-user] How to connect to private instance of galaxy from another computer
Michael Milevskiy
-
2013/03/13
Re: [galaxy-user] [devteam-bioc] User dropdown menu as galaxy input file
Dan Tenenbaum
-
2013/03/13
[galaxy-user] User dropdown menu as galaxy input file
Alex Upton
-
2013/03/13
[galaxy-user] Knowing who is currently logged into your system
Akshay Vivek Choche
-
2013/03/13
Re: [galaxy-user] Cuffdiff statistical calculations are inconsistent?
Jeremy Goecks
-
2013/03/13
Re: [galaxy-user] Cuffdiff statistical calculations are inconsistent?
Mohammad Heydarian