Hi Richard,
The public Main Galaxy server has been very busy lately. To let you
know, the size of the job will not determine when a job will start, only
the time it was started/queued with respect to other user's jobs also
queued and in less common circumstances the specific type of job (that
requires a particular cluster node type - this was not the case for your
job). How long a job executes (will be in the "yellow" running state) is
related to the size of the inputs, the type of job, and parameters.
I see that these have now failed with a cluster error - please re-run
the failed jobs one more time. If you continue to have problems, please
submit one of the error datasets as a bug report, leaving all
inputs/outputs undeleted.
http://wiki.galaxyproject.org/Support#Reporting_tool_errors
Very sorry that this was causing confusion. And thanks Peter for the help!
Jen
Galaxy team
On 5/9/13 4:27 AM, Casey,Richard wrote:
Hi,
We have two Filter FASTQ jobs running on the Galaxy public server. Both jobs
have been running for more than four days. This seems like an excessive amount
of runtime. Do Filter FASTQ jobs normally take this long to run?
----------------------------
Richard
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--
Jennifer Hillman-Jackson
Galaxy Support and Training
http://galaxyproject.org
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
