Hello, I want to add Ray (a scalable de novo assembler for genomes and metagenomes) to Galaxy. Ray is GPLv3 [1].
I have read http://wiki.galaxyproject.org/Admin/Tools/Add%20Tool%20Tutorial and I understand that I have to write a Tool Definition File in XML. I also visited the source code here: https://bitbucket.org/galaxy/galaxy-central/src/5de636ce68faededc52d7b0c16167fbef98be786/tools/sr_assembly?at=default I will also have to write a wrapper for Ray to prepare the command line from the options provided by the Galaxy API. But where is stored the executable (in my case, where is sdtored Ray) ? Does Galaxy include the specs to build all the tools available in Galaxy-Central ? --- [1] http://denovoassembler.sourceforge.net/ ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
