Hello,
Have you seen the tool ' Get Data -> ENA SRA"?
Once a project is searched for, you will find direct links to import the
FASTQ data direct into Galaxy. Both the original submitted and the
processed archive format in many cases.
Best,
Jen
Galaxy team
On 6/16/13 7:54 AM, Murphy, Theresa wrote:
Is it possible to upload files from the NCBI sra data base, then use
fastq-dump from the sra toolit within galaxy? If not, could these
tools be added?
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