You haven't answered the question about if you created the
checkpoints with an atomic cpu without caches. 

Ali 

On 02.05.2012
19:58, Andrew Cebulski wrote: 

> I have not run with the checker CPU
recently. Here's the stderr output from a run I did awhile back: 
>
http://dl.dropbox.com/u/2953302/gem5/err.0 [30] 
> Note that the
instruction match error is before my benchmark actually starts running.
The start of my boot script checks to see if my files image is mounted
(which it is), then continues on to run the benchmark. I booted the
system, mounted my files image, then took a checkpoint. I've been
running all my tests from that checkpoint. I found where my benchmark
started based on the ASID (from ExecAsid debug flag). 
> I delayed the
start of gathering trace data until the second-to-last linear increase
in dynamic instructions in-flight. I'm running a new trace now. 
>
-Andrew 
> 
> On Wed, May 2, 2012 at 5:28 PM, Ali Saidi <sa...@umich.edu
[31]> wrote:
> 
>> Something is wrong well before this point. There is
no reason that address 0x0 or 0x4 should be translated. 
>> 
>> Did you
happen to create a checkpoint when caches were in the system? 
>> 
>>
Have you tried to run with the checker cpu and see if it detects any
errors? 
>> 
>> Ali 
>> 
>> On 02.05.2012 17:22, Andrew Cebulski wrote:

>> 
>>> They are data TLB misses that occur as the in-flight
instruction count rises (at 0x0 and 0x4). The last TLB miss before the
in-flight instruction count finally linearly decreases is to 0x200.
Also, at the start of the rising slope, I see a miss to 0x8 and 0x2508c.

>>> 
>>> Here's a trace file:
>>> 
>>>
http://dl.dropbox.com/u/2953302/gem5/tlb.out [26] 
>>> To reduce size, I
just have lines that have either TLB or walker in them. 
>>> I do see
only a handful of instruction TLB misses. 
>>> 
>>> -Andrew
>>> 
>>> On
Wed, May 2, 2012 at 11:10 AM, Ali Saidi <sa...@umich.edu [27]>
wrote:
>>> 
>>>> Hi Andrew, 
>>>> 
>>>> Thanks for digging into this. I
think there is an issue somewhere, but I'm still not sure where. 
>>>>

>>>> Ali 
>>>> 
>>>> On 01.05.2012 23:34, Andrew Cebulski wrote: 
>>>>

>>>>> Okay, I'm positive now that the issue lies with delayed
translations that are squashed before finishing.
>>>> 
>>>> On the data
on instruction side? You seem to allude to data in the paragraph below,
but then instructions in the latter text. 
>>>> 
>>>>> It seems to me
like speculative load/stores are being executed, rather than waiting for
the instructions to commit. Once the instructions begin getting
(speculatively) executed in the TLB, a reference is left there, which
seems hard to root out and dereference after the instruction ends up
being squashed. At least, I have not been able to find that out in the
source code as of yet. Can anyone clarify on this?
>>>> 
>>>> There
should only be one translation outstanding from each instruction and
data side walker. Any nested transactions should be queued in the
walker. Until one finishes, I'm not sure how multiple would ever be
outstanding. 
>>>> 
>>>> R
>>>> 
>>>>> ncreases linearly for varying
periods of time: 
>>>>>
http://dl.dropbox.com/u/2953302/gem5/dyninst_vs_dyninstptr_dramsim2.png
[1] 
>>>>> After enabling the TLB debug flag, I see that the linear
increase in instructions in flight is proportional to the number of TLB
misses. These TLB misses have a much larger delay (resulting in
translation delays) due to the fact the DramSim2 models the memory
system more accurately. It seems that with the classic memory system,
TLB misses often do not have translation delays. For whatever reason, it
would also seem that every instruction that has a TLB miss also is
eventually squashed... 
>>>>> 
>>>>> From a data side perspective this
is reasonable. While a miss is ou
>>>> some point instructions will stop
committing and thus the instructions in flight will begin to rise until
the miss is satisfied. 
>>>> 
>>>> Here's a summary of outputs from my
trace. These two DPRINTF messages appears on the rising slopes (repeated
up until the peak): 
>>>> TLB
>>>> 
>>>>> r 0x4(656) 
>>>>> 
>>>>> This
is interesting/odd. I don't know a good reason why (1) a miss would be
outstanding to both address 0 and address 4 at the same time. In almost
all cases these pages are marked as no-access to detect segfaults.
Perhaps there is a
>>>> the cpu is getting into a loop faulting on a bad
access and then faulting again on the fault handler. I could imagine
this would happen if there was some corruption in the memory system (for
example the timings in dramsim exposing a bug in the cache models or
something). 
>>>> 
>>>> At the peak, the following message appears (from
fetch) almost every tick for (what I believe to be) every single one of
the table walkers that were squashed. 
>>>> Fetch is waiting ITLB walk
to finish! 
>>>> 
>>>> There must be another walk in flight? The
instruction side will only have one fault outstanding at once.
Successive branch mispredicts will
>>>> 
>>>>> nd "does the right
thing." 
>>>>> 
>>>>> The problem is that these ITLB table walks are for
instructions that wer
>>>> much as 0.3 billion cycles earlier, and since
been removed from the CPU's instruction list. 
>>>> 
>>>> I'm not
following here. 
>>>> 
>>>> Any help will be greatly appreciated in
solving this problem. I've hit a roadblock with getting Ruby working
with ARM, most likely due to the fact
>>>> 
>>>>> the 64 MB for the boot
loader. I brought this up in my last email about trying to get Ruby
working. Therefore, I'm trying to get this DramSim2 integration fixed so
I can start modeling FS with D
>>>> div> 
>>>> 
>>>> Brad/Steve/Nilay
anyone have a suggestion on how to make this work? 
>>>> 
>>>> Note that
these problem
>>>> 
>>>>> rtion). Due to time constraints, I haven't
tested on other benchmarks. 
>>>>> Thanks, 
>>>>> Andrew 
>>>>> 
>>>>>
On Tue, May 1, 2012 at 4:27 AM, Andrew Cebulski <af...@drexel.edu [2]>
wrote: 
>>>>> 
>>>>> Hey Gabe, 
>>>>> Thanks for this.
>>>> l. I just
recently got back into debugging this problem. I made a small change in
src/base/refcnt.hh to allow me to return the current count of references
to a DynInst object. 
>>>> I the
>>>> 
>>>>> extra visibility. 
>>>>>
I've found one memory store instruction that seems to be getting lost.
What's happening is that is progresses as far as getting executed in the
IEW once, but a delayed translation occurs, deferring the store. By the
time it reenters the IEW, the IQ has marked the instruction as squashed.
Everything progresses as usual from here on out, with one exception.
When the instruction is removed from the CPUs instruction list, there is
one reference count hanging. 
>>>>> I've added in some additional
debugging for my traces to help narrow down where this reference is
coming from. As far as I can tell, it's because of a call to
initiateAcc() within the executeStore function in the lsq unit. Please
see the following two traces. The first trace shows what I just
discussed. The second trace is another memory store instruction that got
squashed, however, it was squashed upon its first entry into the IEW,
therefore it never started execution. 
>>>>>
http://dl.dropbox.com/u/2953302/gem5/lostinstruction.out [21] 
>>>>>
http://dl.dropbox.com/u/2953302/gem5/similarinstruction.out [22] 
>>>>>
Let me know if you have any ideas based on these two instruction traces.
I do not understand how the initiateAcc function results in another
reference, but maybe someone else does.... Since I don't see how it
makes a reference, it's hard to find out how to make sure it gets
dereferenced... 
>>>>> Unfortunately, I haven't been able to add a
DPRINTF in src/base/refcnt.hh ...this would make things more clear (i.e.
exactly when references/deferences occur). Let me know if you have any
advice on this...if it's possible. I can't seem to get the right include
files, and likely right SConscript compile order... 
>>>>> Thanks,

>>>>> Andrew 
>>>>> 
>>>>> On Sat, Apr 7, 2012 at 9:48 PM, Gabe Black
<gbl...@eecs.umich.edu [23]> wrote: 
>>>>> 
>>>>>> Without digging into
things too deeply, it looks like you may be leaking references to
dynamic instructions. The CPU may think it's done with one, but until
that final reference is removed, the object will hang around forever. I
think I've had problems before where there reference count ended up off
by one somehow and instructions would start piling up. It's also
possible that a clog develops in O3's pipeline and some internal
structure stops letting instructions through and starts accumulating
them. Either of these problems will be annoying to track down, but with
enough digging I've been able to fix these sorts of things.
>>>>>>

>>>>>> This may have more to do with O3 not handling the benchmark
you're running well rather than a problem with your new DRAM model.
There may be some interaction between the two, though, where the new
memory makes the timing line up to cause O3 to behave poorly. What you
can do is instrument dynamic instruction creation and destruction and
reference counting (try print "this" for both the reference counting
wrapper and the dyn inst itself) and turn it on as close as you can to
where things go bad tick wise. Then look for an instruction which gets
lost, and look for where it's reference count is incremented and
decremented. It should be relatively easy to pair up where references
are created and destroyed, and you should be able to identify the
reference which never goes away. Then you need to figure out where that
reference is being created. After that, you should have enough
information to identify why the reference counting isn't being done
correctly. It's arduous, but that's the only way.
>>>>>> 
>>>>>> It's
important to also make sure reference counts aren't decremented to zero
prematurely. I had a problem once where that happened and the memory
behind the object was updated by something that didn't know it was dead.
The memory had since been reallocated to another object of the same
type, so that other object reflected what happened to the phantom one.
If I remember that manifested as something weird like an add causing a
page fault or something.
>>>>>> 
>>>>>> Gabe 
>>>>>> 
>>>>>> On 04/07/12
18:21, Andrew Cebulski wrote: 
>>>>>> 
>>>>>>> Hi all, 
>>>>>>> I've
looked into this problem some more, and have put together a couple
traces. I've been becoming more familiar with how gem5 handles dynamic
instructions, in particular how it destroys them. I have two traces to
compare, one with the physical memory, and the other with the integrated
dramsim2 dram memory. I also have two plots showing instruction counts
over time (sim ticks). All of these are linked at the end of the email.

>>>>>>> First, I'm going to go into what I've been able to interpret
regarding how instructions are destroyed. In particular, comparing when
DynInst's vs. DynInstPtr's are deconstructed/removed from the cpu. I
separate these because I've seen a difference, as I discuss later. These
explanations are fairly non-existent on the wiki. There is a section
header waiting to be filled... 
>>>>>>> From what I have been able to
gather from the code, there is a list of all the instructions in flight
in cpu/o3/cpu.cc called instList, with the type DynInstPtr. There are
three conditions to instructions being cleaned from this list: 
>>>>>>>
1.) The ROB retires its head instruction 
>>>>>>> 2.) Fetch receives a
rob squashing signal from the commit, resulting in removing any
instruction not in the ROB 
>>>>>>> 3.) Decode detects an incorrect
branch prediction, resulting in removal of all instructions back to the
bad seq num. 
>>>>>>> Once all five stages have completed, the CPU
cleans up all the removed in-flight instructions. This line in
particular in cleanUpRemovedInsts() in cpu/o3/cpu.cc deconstructs a
DynInstPtr: 
>>>>>>> instList.erase(removeList.front()); 
>>>>>>> When I
turn on the debug flag O3CPU, I see the message "Removing instruction,
..." (from o3/cpu.cc) with the threadNum, seqNum and pcState after all 5
cpu stages have completed, and one of the conditions above is met. I
also see what tick it occurs on. 
>>>>>>> When I turn on the DynInst
debug flag, I see when instructions are created and destroyed
(cpu/base_dyn_inst_impl.hh) and what tick. From analyzing the trace
files, I've gathered that this takes into account that instructions have
different execution lengths. So if one tick a memory instruction in the
instList (DynInstPtr) is removed, the DynInst for that memory
instruction will occur much later (i.e. 1M ticks later). I have yet to
determine how this is implemented. 
>>>>>>> Now for the problem.

>>>>>>> What I'm seeing when I run dramsim2 dram memory is a
significant difference between the size of the instList vector (of
DynInstPtr objects), and the size of dynamic instruction count (of
DynInst objects). The benchmark I'm running is libquantum from SPEC
2006. For the first roughly 130B ticks, the dynamic instruction count
kept in cpu/base_dyn_inst.impl.hh shadows the instList size in o3/cpu.cc
(figure linked below) very closely. Around tick 130B after libquantum
started, it starts hitting what I'm assuming are loops (therefore branch
prediction), resulting in some behavior that seems to imply improper
instruction handling (i.e. more instructions in flight than allowed by
ROB). 
>>>>>>> I wasn't able to sync-up the physical and dramsim2 traces
exactly by trace, but they should represent roughly the same area of
execution. They don't execute the same due to the dramsim2 modeling the
memory differently (i.e. latency and other delays). 
>>>>>>> I've shared
both traces on my public Dropbox here -- 
>>>>>>>
http://dl.dropbox.com/u/2953302/gem5/physical-fs-040612-ROB-Commit-DynInst-Fetch-O3CPU.out.gz
[14] 
>>>>>>>
http://dl.dropbox.com/u/2953302/gem5/dramsim2-fs-040612-ROB-Commit-DynInst-Fetch-O3CPU-2.out.gz
[15] 
>>>>>>> Here are a couple plots of tick versus instruction count,
with respect to cpu->instcount in cpu/base_dyn_inst.impl.hh and
instList.size() in cpu/o3/cpu.cc. --
http://dl.dropbox.com/u/2953302/gem5/dyninst_vs_dyninstptr_physical.png
[16]
>>>>>>> 
>>>>>>>
http://dl.dropbox.com/u/2953302/gem5/dyninst_vs_dyninstptr_dramsim2.png
[17] 
>>>>>>> Note that I added the printout of the instList size to an
existing O3CPU DPRINTF in cleanUpRemovedInsts() in cpu/o3/cpu.cc.

>>>>>>> Here are the commands I ran to parse the traces into data files
to analyze in MATLAB and create the plots: 
>>>>>>> zgrep DynInst
dramsim2-fs-040612-ROB-Commit-DynInst-Fetch-O3CPU-2.out.gz | grep
destroyed | awk '{print $1,$11}' > cpuinstcount.out 
>>>>>>> zgrep
instList dramsim2-fs-040612-ROB-Commit-DynInst-Fetch-O3CPU-2.out.gz |
awk '{print $1,$11}' > instlistsize.out 
>>>>>>> It seems to me like the
problem might lie in gem5, but has just been exposed by integrating this
more detailed memory model, dramsim2, into gem5. Either that, or their
are some timing errors in how dramsim2 was integrated. I doubt this,
however, since those first 190B ticks executed used the dramsim2 memory.
I believe the problem is a combination of memory instructions + complex
loops (branch prediction), resulting in improper destroying of
instructions. 
>>>>>>> I've included the ROB, Commit, Fetch, DynInst and
O3CPU debug flags. Their are 192 ROB entries, which is why the instList
size generally has a max of about 192 instructions. The dynamic
instruction counts (seen in the dramsim2 plot) seem to also imply that
instructions are incorrectly been removed from the ROB, and then from
the cpu's instruction list in cpu.cc, which allows more and more
instructions to be added to the system (possibly from a bad branch).

>>>>>>> I appreciate any help in debugging this and further figuring
out the root problem, just let me know if you need anything else from
me. I don't have much more time at the moment to debug, but I can take
any advice for quick changes and/or additional traces, then send the
results back to the list for discussion. 
>>>>>>> Thanks, 
>>>>>>>
Andrew 
>>>>>>> P.S. Paul - I did try decreasing the size of the
dramsim2 transaction (and even command) queue from 512 to 32. The same
instructions problem occurred. It basically just decreased the execution
time. 
>>>>>>> 
>>>>>>> On Wed, Mar 14, 2012 at 2:10 PM, Ali Saidi
<sa...@umich.edu [18]> wrote:
>>>>>>> 
>>>>>>>> The error is that there
are more that 1500 instructions currently in flight in the system. It
could mean several things: 
>>>>>>>> 
>>>>>>>> 1. The value is somewhat
arbitrarily defined and maybe there are more than 1500 in your system at
one time? 
>>>>>>>> 
>>>>>>>> 2. Instructions aren't being destroyed
correctly 
>>>>>>>> 
>>>>>>>> You could try to to run a debug binary so
you'll get a list of instructions when it happens or increase the number
which may be appropriate for certain situations (but 1500 is quite a few
inflight instructions). 
>>>>>>>> 
>>>>>>>> Ali 
>>>>>>>> 
>>>>>>>> On
13.03.2012 10:56, Andrew Cebulski wrote: 
>>>>>>>> 
>>>>>>>>> Hi
Xiangyu, 
>>>>>>>>> I just started looking into this some more. So at
first I thought it was due to updating to a more recent revision, but
then I went back to revision 8643, added your patch, built and
ran....and now get the error with it too (when running ARM_FS/gem5.opt).
I"m testing now to see if an update to SWIG might have resulted in this
error, maybe someone on the mailing list would know if that's possible.
The difference is 1.3.40 vs. 2.0.3, both of which are supported
according to the dependencies wiki page. 
>>>>>>>>> Just for
completeness, here's the error from revision 8643: 
>>>>>>>>>
build/ARM_FS/cpu/base_dyn_inst_impl.hh:149: void BaseDynInst::initVars()
[with Impl = O3CPUImpl]: Assertion `cpu->instcount 
>>>>>>>>> 
>>>>>>>>>
I have not tried running with gem5.debug, so I will be doing that today.
Maybe this is an assertion that is occurring due to an optimization.
That would mean it wouldn't be triggered in gem5.debug since it runs
without optimizations. Have you tested all debug, opt and fast with your
tests? 
>>>>>>>>> Thanks, 
>>>>>>>>> Andrew
>>>>>>>>> 
>>>>>>>>> On Tue,
Mar 13, 2012 at 1:37 PM, Rio Xiangyu Dong <riosher...@gmail.com [11]>
wrote: 
>>>>>>>>> 
>>>>>>>>>> Hi Andrew, 
>>>>>>>>>> 
>>>>>>>>>> I
didn't see this error in my simulations. May I ask which gem5 version
you are using? I find some of the latest code updates do not comply with
my changes. I am still using the DRAMsim2 patch on Gem5 repo8643, and
have run all the runnable benchmarks in SPEC2006, SPEC2000, EEMBC2, and
PARSEC2 on ARM_SE. 
>>>>>>>>>> 
>>>>>>>>>> Thank you! 
>>>>>>>>>>

>>>>>>>>>> Best, 
>>>>>>>>>> 
>>>>>>>>>> Xiangyu 
>>>>>>>>>>

>>>>>>>>>> FROM: Andrew Cebulski [mailto:af...@drexel.edu [8]]

>>>>>>>>>> SENT: Thursday, March 08, 2012 6:52 PM 
>>>>>>>>>>

>>>>>>>>>> TO: gem5 users mailing list CC:riosher...@gmail.com [9];
sa...@umich.edu [10] 
>>>>>>>>>> 
>>>>>>>>>> SUBJECT: Re: [gem5-users] A
Patch for DRAMsim2 Integration 
>>>>>>>>>> 
>>>>>>>>>> Xiangyu,

>>>>>>>>>> 
>>>>>>>>>> I've been having an issue recently with the
number of instructions I've been seeing committed to the CPU (I have a
separate thread on this). It turns out the issue seems to be coming from
this patch you created to integrate DramSim2 with Gem5. Unfortunately,
I've been running with gem5.fast, not gem5.opt. So up until now, I
haven't been seeing assertions. I thought I'd run it with gem5.opt or
debug back in December, but I must not have. My runs on the Arm O3 cpu
fails with this assertion: 
>>>>>>>>>> 
>>>>>>>>>>
build/ARM/cpu/base_dyn_inst_impl.hh:149: void BaseDynInst::initVars()
[with Impl = O3CPUImpl]: Assertion `cpu->instcount 
>>>>>>>>>>

>>>>>>>>>> -Andrew 
>>>>>>>>>> 
>>>>>>>>>>> Date: Sun, 18 Dec 2011
01:48:58 -0800
>>>>>>>>>>> From: "Dong, Xiangyu" <riosher...@gmail.com
[3]>
>>>>>>>>>>> To: "gem5 users mailing list" <gem5-users@gem5.org
[4]>
>>>>>>>>>>> Subject: [gem5-users] A Patch for DRAMsim2 Integration
Message-ID: gmail.com [5]> 
>>>>>>>>>>> 
>>>>>>>>>>> Content-Type:
text/plain; charset="us-ascii"
>>>>>>>>>>> 
>>>>>>>>>>> Hi
all,
>>>>>>>>>>> 
>>>>>>>>>>> I have a Gem5+DRAMsim2 patch. I've tested
it under both SE and FS modes.
>>>>>>>>>>> I'm willing to share it
here.
>>>>>>>>>>> 
>>>>>>>>>>> For those who have such needs, please go
to my website
>>>>>>>>>>> www.cse.psu.edu/~xydong [6] to download the
patch and test it. To enable
>>>>>>>>>>> DRAMSim2, use se_dramsim2.py
script instead of se.py (for FS, you can create
>>>>>>>>>>> by
yourself). The basic idea to enable the DRAMsim2 module is to use
the
>>>>>>>>>>> derived DRAMMemory class instead of PhysicalMemory
class.
>>>>>>>>>>> 
>>>>>>>>>>> Please let me know if there are
bugs.
>>>>>>>>>>> 
>>>>>>>>>>> Thank you!
>>>>>>>>>>> 
>>>>>>>>>>>
Best,
>>>>>>>>>>> 
>>>>>>>>>>> Xiangyu Dong
>>>>>>>>>>> 
>>>>>>>>>>>
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[7]>
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>>>>>>>>>
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mailing list
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>>>>>>>
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>>>>>>>
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>>>>>>

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Links:
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[1]
http://dl.dropbox.com/u/2953302/gem5/dyninst_vs_dyninstptr_dramsim2.png
[2]
mailto:af...@drexel.edu
[3] mailto:riosher...@gmail.com
[4]
mailto:gem5-users@gem5.org
[5] http://gmail.com
[6]
http://www.cse.psu.edu/%7Exydong
[7]
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[8]
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[9] mailto:riosher...@gmail.com
[10]
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[11] mailto:riosher...@gmail.com
[12]
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[13]
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[14]
http://dl.dropbox.com/u/2953302/gem5/physical-fs-040612-ROB-Commit-DynInst-Fetch-O3CPU.out.gz
[15]
http://dl.dropbox.com/u/2953302/gem5/dramsim2-fs-040612-ROB-Commit-DynInst-Fetch-O3CPU-2.out.gz
[16]
http://dl.dropbox.com/u/2953302/gem5/dyninst_vs_dyninstptr_physical.png
[17]
http://dl.dropbox.com/u/2953302/gem5/dyninst_vs_dyninstptr_dramsim2.png
[18]
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[19] mailto:gem5-users@gem5.org
[20]
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[21]
http://dl.dropbox.com/u/2953302/gem5/lostinstruction.out
[22]
http://dl.dropbox.com/u/2953302/gem5/similarinstruction.out
[23]
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[24] mailto:gem5-users@gem5.org
[25]
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[26]
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[27]
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[29]
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[30]
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