Hi all, I found the phastCon score is different between genome browser and original phastCon file which downloaded from genome bowser website. For example, if we input human chr15:18,295,803-18,295,903 on the browser, and you will find no conservation score/no multiple alignment for this region for 28way phastCon result. But, if we directly open the file for 28way_placenta(chr15.wigFix) file, the first step is this region, you would find the conservation score is not low(ranged from 0.181-0.361).
I think there are some problems for some parts of the data/genome browser/update. Can anyone check it or give me some comments? ZC _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
