Hello, First to confirm, you are using the public web site at http://genome.ucsc.edu and not a mirror?
Normally, if a query stalls, the solution is to try extracting the output in smaller chunks, such as per chromosome. However your error statement is not usually associated with that particular issue (large size of output). Also, a quick test of a query similar to yours does not reproduce the error. Please send the exact steps you are performing and we can help to troubleshoot. Thanks, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Vinay K Mittal" <[email protected]> wrote: > From: "Vinay K Mittal" <[email protected]> > To: "genome UCSC genome query" <[email protected]> > Sent: Tuesday, September 22, 2009 7:21:36 AM GMT -08:00 US/Canada Pacific > Subject: [Genome] Table browser download > > Hi, > I've been trying to download UCSC human known gene sequences (5'UTR + > CDS + 3'UTR) using table browser. But everytime I tried to download, > the download stops without completion and when I open the downloaded > file I get the following error in the file : > > "Couldn't connect to database hg18 on mysqlrr as hguser." > "Can't connect to MySQL server on 'mysqlrr' (99)". > > Is there any other way to download those sequences?? > > Thanks. > > -- > -------- > Vinay Kumar Mittal > MS,Bioinformatics > Georgia Institute of Technology > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
