I was looking at various genes on UCSC's gene browser and hapmap.org's gene browser and they don't seem to match up. For example the locations of the nucleotides do not match up on various genes using the two sites' browsers.
NM_030881 yields these different positions and lengths from the different sites. 37,209,389 to 37,214,481 //ucsc 37,209,391 to 37,214,912 //hapmap.org NM_024324 48,698,287 to 48,707,190 //ucsc 48,698,348 to 48,707,178 //hapmap.org NM_007310 18,330,070 to 18,337,496//ucsc 18,330,070 to 18,336,528 //hapmap If I am not mistaken, ucsc and hapmap both are working off of build 36.1 from www.ncbi.nih.gov Any guidance would be much appreciated.--Ben ( The browsers are located at http://genome.ucsc.edu/cgi-bin/hgGateway?org=Human&db=hg18&hgsid=143903444 http://hapmap.ncbi.nlm.nih.gov/cgi-perl/gbrowse/hapmap3r2_B36/ ) _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
