Create two wiggle or bigWig tracks. One for your sense data and one for your antisense data. We do not have a graphing option to show two data values in the same location. See also: http://genome.ucsc.edu/goldenPath/help/bigWig.html http://genomewiki.ucsc.edu/index.php/Selecting_a_graphing_track_data_format
--Hiram Yuan, Qiaoping (NIH/NIAAA) [E] wrote: > Hi, There, > > We have some RNA-seq data showing sense and antisense expression at the same > genomic positions. Which data format should I use to display this kind of > data in UCSC Genome Browser? I tried WIG and BedGraph. These two formats seem > to be plotted as unique data for a given chromosome location. Is there any > way I can plot two data (one > 0 and another < 0 ) in one track for a given > chromosome location. An example data points may looks like this: > > chr19 59302000 59302300 8.6 > chr19 59302000 59302300 -5.3 > chr19 59302600 59302900 3.50 > chr19 59302600 59302900 -0.50 > > Thank you for your help. > > > Qiaoping Yuan > > ====================== > Qiaoping Yuan, Ph.D. > NIH/NIAAA/DICBR/LNG > 5625 Fishers Lane > Suite 3S32A, MSC 9412 > Rockville, MD 20852 > Phone: 1-301-443-7632 > Fax: 1-301-480-2839 > E-mail: [email protected] _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
