Hello,

When you see that data in one row, then that is a function of the track 
controls = dense. The color coding is a function of how the track is set up 
using keys in the datafile to distinguish between the types.

http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#CustomTracks
See the section: Track lines

Please let us know if you have any questions,
Jennifer

------------------------------------------------ 
Jennifer Jackson 
UCSC Genome Bioinformatics Group 

----- "Katarina Truvé" <[email protected]> wrote:

> From: "Katarina Truvé" <[email protected]>
> To: [email protected]
> Sent: Monday, September 28, 2009 2:25:37 AM GMT -08:00 US/Canada Pacific
> Subject: [Genome] SNPs in one line with different colors
>
> Hi,
> I have noticed that when displaying SNPs (dense) on the browser you  
> get all the SNPs in one line, and they
> have different colors.
> 
> This is exactly what I would like to do but for my own custom tracks, 
> 
> but I read all instructions and can't find a way to this.
> 
> Please let me know how your SNP files were created so I can do the
> same.
> 
> 
> Best regards,
> 
> Katarina, Truvé
> 
> 
> Katarina Truvé
> Dept. Animal Breeding and Genetics
> Swedish University of Agricultural Sciences (SLU)
> P.O. Box 597, S-75124 Uppsala, Sweden
> [email protected]
> 
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