Hello:
I followed the Wiki instruction s to create a custom array track but I
get this error:
Error Unrecognized format type=array line 2 of custom track
This is a sample of the file (also attached):
track type="array" expScale=6.49 expStep=1
expNames
=
"Adrenals
,Brown_Fat
,Brain
,Colon
,Duodenum
,Heart
,Ileum
,Jejunum,Kidney,Liver,Lung,Muscle,Spleen,Stomach,Testis,White_Fat"
name="Tissuesurvey16" description="Illumina Mouse-6 V1.1 R1 Expression
Survey of 16 Mouse Tissues"
105290026 chr10 36553035 36553085 50 +
36553035 36553085 0 1 36553035,
16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.23
,-6.43
,-4.69
,-6.25
,-6.36,-5.24,-6.3,-6.37,-6.48,-6.49,-6.47,-4.43,-6.47,-6.39,-6.46,-6.4
610369 chr7 117951434 117953327 50 + 117951434
117953327 0 2
117951434,117953309, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.13
,-6.3
,-5.89
,-5.37
,-6.01,-6.32,-5.94,-5.99,-6.22,-6.49,-6.19,-6.17,-5.77,-5.83,-6.41,-6.23
1450014 chr19 7399897 7399947 50 - 7399897 7399947 0 1
7399897, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.46
,-6.44
,-6.32
,-6.34
,-6.48,-6.4,-6.39,-6.36,-6.34,-6.39,-6.31,-6.43,-6.38,-6.49,-6.25,-6.39
380019 chr1 196957530 196957580 50 - 196957530
196957580 0 1
196957530, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-5.04
,-4.33
,-5.88
,-3.57
,-3.26,-4.95,-3.19,-3.27,-4.77,-4.14,-5.04,-5.59,-4.61,-3.79,-6.49,-4.91
100430441 chr2 103103512 103103562 50 -
103103512 103103562 0 1
103103512, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.3
,-6.42
,-6.44
,-6.38
,-6.39,-6.39,-6.35,-6.37,-6.39,-6.27,-6.38,-6.39,-6.39,-6.36,-6.43,-6.49
610088 chr14 99476525 99476575 50 - 99476525
99476575 0 1 99476525, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.29
,-6.31
,-6.28
,-6.49
,-6.27,-6.38,-6.25,-6.26,-6.39,-6.17,-6.37,-6.06,-6.22,-6.28,-5.95,-6.25
870181 chr9 32206438 32206488 50 + 32206438
32206488 0 1 32206438, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.46
,-6.37
,-6.49
,-6.42
,-6.39,-6.38,-6.39,-6.47,-1.47,-6.39,-6.39,-6.48,-6.01,-6.43,-6.37,-6.45
103060390 chr9 40085439 40085489 50 +
40085439 40085489 0 1 40085439,
16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-6.44
,-6.44
,-6.24
,-6.43
,-6.41,-6.49,-6.47,-6.47,-6.39,-6.31,-5.6,-6.42,-6.42,-6.42,-6.47,-6.38
4480390 chr1 165187948 165187998 50 - 165187948
165187998 0 1
165187948, 16
0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15
-4.18
,-4.73
,-5.99
,-6.45
,-4.84,-2.73,-6.29,-5.67,-5.81,-6.49,-5.25,-2.75,-5.67,-6.22,-6.07,-4.16
Thank you in advance for your assistance.
Ricardo.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ricardo A. Verdugo S., D.V.M. Ph.D.
Postdoctoral Fellow
Gary Churchill Group
The Jackson Laboratory
600 Main Street,
Bar Harbor, ME 04609
[email protected]
+1-207-288-6715
+1-207-288-6847 Fax
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_______________________________________________
Genome maillist - [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome
