Hello -- I've been trying to make amino acid change predictions using UCSC genePred files (hg18; refseq refGene). However, it seems that for at least a couple transcripts (ex. NM_000256) the refGene exons are incorrect and different from NCBI Genbank, which I presume to be a version difference.
I was considering rebuilding the refGene table (installing the UCSC source table for gtfToGenePred<http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/gtfToGenePred>and trying to convert transcript definitions from NCBI or ENSEMBL), but I am wondering whether the refGene table will be updated in the near future. Thank you for any help. -Dan _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
