Hi, I would like to compile the mafsInRegion program. I follow the instructions and manage to get up to the step where the fixcr example works.
When I try to make in the I mafAddIRows directory I get the following message: mafAddIRows make[1]: *** No rule to make target `../../../lib/i386/jkhgap.a', needed by `mafAddIRows'. Stop. make: *** [all] Error 2 I try to make again in kent/src/hg (following an previous post here https://lists.soe.ucsc.edu/pipermail/genome/2003-November/003529.html) and in all directory tree to mafAddIRows. Here is what I get in kent/src/hg: cd lib && make gcc -O -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i386 -DJK_WARN -Wall -Werror -Wno-unused-variable -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I/usr/include/mysql -o hgFind.o -c hgFind.c cc1: warnings being treated as errors hgFind.c: In function ‘searchSpecial’: hgFind.c:1204: warning: ‘type’ may be used uninitialized in this function make[1]: *** [hgFind.o] Error 1 make: *** [hgLib] Error 2 Not sure how to continue from here. Thanks EHC _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
