Silvia,
Thank you for pointing this out to us. I am having it looked into, and will
get back to you soon.
For now, one thing you can do to access the data in this region, is to go to
the Table Browser ("Tables" on the blue bar on the top of the page) and select
this table at the coordinates of your blat hit: chr14:106306704-106312011
You can at least output some data this way in the meantime.
If you have any further questions, please don't hesitate to contact us again.
Kayla Smith
UCSC Genome Bioinformatics Group
----- "Silvia Jimenez" <[email protected]> wrote:
> Dear Sir,
>
> I have some problems in displaying human mRNA "full", it seems to stay
>
> "packed" even if I as that is displayed with the "full" option.
> It seems to be something with the region where my protein matches in
> the
> genome since I do not have the same problem elsewhere.
>
> Many thanks
>
> Silvia
>
> sequence sent for blat
>
>
> YourSeq
>
> APTKAPDVFP IISGCRHPKD NSPVVLACLI TGYHPTSVTV TWYMGTQSQP QRTFPEIQRR 60
> DSYYMTSSQL STPLQQWRQG EYKCVVQHTA SKSKKEIFRW PESPKAQASS VPTAQPQAEG
> 120
> SLAKATTAPA TTRNTGrgge ekkkekekee qeeretktpE CPSHTQPLGV YLLTPAVQDL
> 180
> WLRDKATFTC FVVGSDLKDA HLTWEVAGKV PTGGVEEGLL ERHSNGSQSQ HSRLTLPRSL
> 240
> WNAGTSVTCT LNHPSLPPQR LMALREPAAQ APVKLSLNLL ASSDPPEAAS WLLCEVSGFS
> 300
> PPNILLMWLE DQREVNTSGF APARPPPQPG STTFWAWSVL RVPAPPSPQP ATYTCVVSHE
> 360
> DSRTLLNASR SLEVSyvtdh gpmk
>
> http://genome.ucsc.edu/cgi-bin/hgTracks?position=chr14:106306704-106312011&db=hg19&ss=../trash/hgSs/hgSs_genome_58aa_676170.pslx+../trash/hgSs/hgSs_genome_58aa_676170.fa&hgsid=146837713
>
> --
>
> ----------------------------------------------------------------------
> Silvia Jimenez
> Swiss Institute of Bioinformatics
> CMU - 1, rue Michel Servet Tel. (+41 22) 379 49 41
> CH - 1211 Geneva 4 Switzerland Fax (+41 22) 379 58 58
> [email protected] http://www.expasy.org/
> ----------------------------------------------------------------------
>
>
> _______________________________________________
> Genome maillist - [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
_______________________________________________
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