Hello Hagen,

Sorry for the inconvenience.  The database that holds the Custom Tracks is 
full.  We are working now to free up some space and hope to have it fixed 
within the hour.

Regards,

----------
Ann Zweig
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu 


----- Original Message -----
From: "Hagen Tilgner" <[email protected]>
To: [email protected]
Sent: Thursday, December 10, 2009 8:50:48 AM GMT -08:00 US/Canada Pacific
Subject: [Genome] new visualization problem

Dear UCSC developpers,

I work on microarray data, whose probes we visualize on your browser. 
This has been working fine for quite a lot of time now. As of today, it 
doesn't. Could you tell me, if there are any problems/changes with the 
browser or if there is an obvious error on my part?

Here's waht I do exactly:
    - usually I follow a link out of an excel-sheet (describing the 
microarray), that takes me directly to the UCSC browser - I attach a 
screenshot of the error message I got.
    - since we have all the bed-files (that are behind the links in the 
excel sheet) in house I also tried to manually upload this file. I 
attach another screenshot of the error message as well as the bed-file I 
uploaded.

I would be very grateful for any solution/explanation.

Thank you
Hagen
 



 

browser position chr17:32380370-32488284
browser hide all  
browser squish probes_G00002
browser full cytoBand gap altGraphX humorMm3Rn3 refGene ensGene reference
browser dense gold rmask 
track name=G00002  visibility=2 color=255,215,0
chr17   32380370        32488284        ref_G00002      1       +       
32380370        32488284        0       12      
259,192,411,138,115,202,165,84,68,81,72,271     
0,1256,3928,4812,37658,39560,40288,41815,70046,71975,82653,107643
track name=00002.0005 description=""  visibility=2 color=131,0,35 
chr17   32380431        32420104        var_00002.0005  1       +       
32380431        32420104        0       5       198,51,110,115,174      
0,1195,4779,37597,39499
track name=00002.0005 description=""  visibility=2 color=131,0,35 
chr17   32380431        32420104        var_00002.0005  1       +       
32380431        32420104        0       5       198,51,110,115,174      
0,1195,4779,37597,39499
track name=00002.0010 description=""  visibility=2 color=131,0,35 
chr17   32384537        32420085        var_00002.0010  1       +       
32384537        32420085        0       4       172,105,115,155 
0,645,33491,35393
track name=00002.0038 description=""  visibility=2 color=131,0,35 
chr17   32422186        32488283        var_00002.0038  1       +       
32422186        32488283        0       4       83,68,81,270    
0,28230,30159,65827
track name=00002.0005.1_B description=""  visibility=3 color=255,215,0
chr17   32381695        32381800        00002.0005.1_B  1       +       
32381695        32381800        0       1       105     0
track name=00002.0005.1_C description=""  visibility=3 color=255,215,0
chr17   32381659        32381695        00002.0005.1_C  1       +       
32381659        32381695        0       2       18,18   0,18
track name=00002.0005.1_D description=""  visibility=3 color=255,215,0
chr17   32381800        32384316        00002.0005.1_D  1       +       
32381800        32384316        0       2       18,18   0,2498
track name=00002.0005.1_E description=""  visibility=3 color=255,215,0
chr17   32381659        32385228        00002.0005.1_E  1       +       
32381659        32385228        0       2       18,18   0,3551
browser squish probes_G00002 
track name="probes_G00002" itemRgb="On"
chr17   32420063        32420088        00002.0005.1_A3-5_CA2   0       +       
32420063        32420088        255,215,0
chr17   32418028        32418083        00002.0005.1_A3-60_CA2  0       +       
32418028        32418083        255,215,0
chr17   32381713        32381738        00002.0005.1_B-1_CA2    0       +       
32381713        32381738        255,215,0
chr17   32381775        32381800        00002.0005.1_B-2_CA2    0       +       
32381775        32381800        255,215,0
chr17   32381744        32381769        00002.0005.1_B-3_CA2    0       +       
32381744        32381769        255,215,0
chr17   32385184        32385209        00002.0005.2_B-1_CA2    0       +       
32385184        32385209        255,215,0
chr17   32384581        32384606        00002.0010.1_A5-1_CA2   0       +       
32384581        32384606        255,215,0
chr17   32384686        32384709        00002.0010.1_A5-2_CA2   0       +       
32384686        32384709        255,215,0
chr17   32384621        32384646        00002.0010.1_A5-3_CA2   0       +       
32384621        32384646        255,215,0
chr17   32385237        32385262        00002.0010.1_A5-4_CA2   0       +       
32385237        32385262        255,215,0
chr17   32384539        32384564        00002.0010.1_A5-5_CA2   0       +       
32384539        32384564        255,215,0
chr17   32385290        32385315        00002.0010.1_B-1_CA2    0       +       
32385290        32385315        255,215,0
chr17   32488196        32488221        00002.0038.1_A3-5_CA2   0       +       
32488196        32488221        255,215,0
chr17   32450424        32450449        00002.0038.1_A5-1_CA2   0       +       
32450424        32450449        255,215,0
chr17   32422206        32422231        00002.0038.1_A5-2_CA2   0       +       
32422206        32422231        255,215,0
chr17   32452359        32452384        00002.0038.1_A5-3_CA2   0       +       
32452359        32452384        255,215,0
chr17   32450460        32450485        00002.0038.1_A5-4_CA2   0       +       
32450460        32450485        255,215,0
chr17   32422230        32422269        00002.0038.1_A5-60_CA2  0       +       
32422230        32422269        255,215,0
chr17   32463045        32463070        00002.0038.1_B-1_CA2    0       +       
32463045        32463070        255,215,0
chr17   32450434        32450459        00002.0044.1_A3-3_CA2   0       +       
32450434        32450459        255,215,0

_______________________________________________
Genome maillist  -  [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome
_______________________________________________
Genome maillist  -  [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome

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