Note that 32-bit processes are limited to 4GB RAM, so for large work a 64-bit machine may be required.
-Galt > Hello, > > The recommendation is to download the kent source tree and compile for your > own system. > http://genome.ucsc.edu/FAQ/FAQdownloads#download27 > http://hgdownload.cse.ucsc.edu/downloads.html -> Source downloads -> UCSC > Genome Browser source download > > The environment needs to be set up correctly > from the top. To do this, see the general help here: > http://genomewiki.cse.ucsc.edu/index.php/The_source_tree > > Specifically, follow the link to http://genome.ucsc.edu/admin/jk-install.html > (The last step #8 is where you would compile utilities in the tree). > > A list of most common utilities and a brief description of each is here: > http://genomewiki.cse.ucsc.edu/index.php/Kent_source_utilities > > For complete usage, type in the utility name at the prompt (once compiled). > > README files throughout the download provide local help specific > to that portion of the source tree. > > Hopefully this will help solve the problem with these two utilities, > Jennifer > > > ------------------------------------------------ > Jennifer Jackson > UCSC Genome Bioinformatics Group > > ----- "giorgio giurato"<[email protected]> wrote: > >> From: "giorgio giurato"<[email protected]> >> To: [email protected] >> Sent: Friday, January 15, 2010 12:40:13 AM GMT -08:00 US/Canada Pacific >> Subject: [Genome] information about bedToBigbed for linux i386 >> >> Hi, >> i'm Giorgio Giurato, a PhD student at Second University of Naples. >> Yesterday i received the mail where you suggest to convert our bed >> file in other formats, like Bigbed. >> Searching between the directory i have note that the program >> bedtoBigbed is not avaible for linux i386. Can i use the one that is >> in the directory linux_x86_64? I think no. >> another dubt is about the script fetchChromSizes. how must i use it? >> Is not clear for me. >> Thank you! >> i wait for your answer. >> Best Regards, >> Giorgio Giurato >> >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
