Hi, I made a mirror in our servers and started uploading our hits onto our genome browser mirror with wiggle and bed format using hgLoadWiggle and hgLoadBed. I have one mutated location in the tags and would like to see them in the genome browser. I am searching unique hits by allowing one mismatch with bowtie. So, I know the exact position of these errors/mutations on the hit tags.
In blat results, I can see the mismatch location. Is it possible to write the base or at least change the color of the mismatches on the tags with any formats? Thanks, Alper Kucukural, Ph.D. Moore Lab Biochemistry and Molecular Pharmacology Dept. Lazare Medical Research Building, 870P UMass Medical School 364 Plantation St. Worcester, MA 01605-4321 Lab: 508-856-2838 Cell: 785-393-8228 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
