Small addition: http://genomewiki.ucsc.edu/index.php/Browser_Installation#If_it_doesn.27t_work...
If it doesn't work... Verify that Apache is really executing the cgi-bin programs and not just downloading them, if you access cgi-bin/hgGateway with a browser - if they are not executed, there is problem with your scriptalias configuration in apache. Have you restarted your web server? This may be the root cause - perhaps try this first - Jennifer On 4/1/10 11:46 AM, Jennifer Jackson wrote: > Hi Sai, > > Perhaps some of the settings are not complete? Specifically, those > mentioned in this section of the Mirror set up instructions: > > http://genomewiki.ucsc.edu/index.php/Browser_Installation#Configure_Apache_server > > > Especially important is the "XBitHack" > > If you continue to have problems, please confirm this setup is complete > and share some details about your system and we can follow up, > > thanks > Jen > > --------------------------------- > Jennifer Jackson > UCSC Genome Informatics Group > http://genome.ucsc.edu/ > > On 4/1/10 10:41 AM, Saigopal Thota wrote: >> Hi, >> >> I am a student at UC Davis. We are trying to setup genome browser for the >> data we have and I successfully created the minimal browser installation. >> But the problem I am facing is that the CGI files (hgGateway etc.) are >> present without .cgi extensions. Our Apache server is not recognizing >> them >> as cgi files and not executing them correctly. As a result I see garbage >> data on the browser. Can you please help me to enable the setting in >> apache >> to execute any file as cgi, since the UCSC genome browser works >> without any >> extension, you may have some idea of how that can be done. Thanks for >> your >> time in advance. >> >> Sai >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
