Hi,
I have about 503 UCSC knownGene canonical transcripts with their exon
coordinates defined on hg19 genome assembly, but their exon and intron
sequences (one fasta record per gene) could not be retrieved using table
browser - knownGene track and output format of sequence. I could not understand
what goes wrong here.
Here are the few of the 503 ucsc ids:
uc001abr.1
uc001abt.3
uc001axj.2
uc001azf.2
uc001bfm.3
uc001bhi.3
uc001bqo.2
uc001buv.3
uc001cdk.2
uc001cqo.1
uc001crl.2
uc001dil.1
uc001dno.2
uc001eda.1
uc001egj.3
uc001ela.3
uc001elf.3
uc001eql.2
uc001fbj.2
uc001fvw.2
Thanks,
H
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