See if this looks better.
-bed12 expect bed12 and count based on blocks.
Only the first three fields are used without -bed12.
On Tue, Jun 15, 2010 at 8:16 PM, Hiram Clawson <[email protected]> wrote:
> How would you rewrite this message to mean what it is supposed to mean ?
>
> ----- Original Message -----
> From: "Peng Yu" <[email protected]>
> To: "Brian Raney" <[email protected]>
> Cc: [email protected]
> Sent: Tuesday, June 15, 2010 6:06:29 PM GMT -08:00 Tijuana / Baja California
> Subject: Re: [Genome] How to avoid breaks when using bedItemOverlapCount to
> convert bed to wig?
>
> This document was confusing to me. I thought it is "-bed12" normally
> only use first three fields. I now realize that it actually mean
> without '-bed12" it only use the first three fields. I'm not sure who
> the maintainer of this command is, would you please help make the
> document clearer.
>
> -bed12 expect bed12 and count based on blocks
> normally only first three fields are used.
>
--
Regards,
Peng
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