It's any filename. Using the number was just an arbitrary convention that helps us keep them straight. Since the .ooc file depends on the tileSize declared when made, and you should only use the .ooc file that was made for the tileSize you are blatting with, it is natural to use them that way.
-Galt ----- Original Message ----- From: "Peng Yu" <[email protected]> To: [email protected] Sent: Friday, June 18, 2010 10:55:19 AM GMT -08:00 US/Canada Pacific Subject: [Genome] Does N in N.ooc have to be the tile size? According to the help of blat, it seems that N has to be a number that is the same as the tile size? But I changed the filename from N.ooc to somename that doesn't start with a number. It seems that blat still runs and the runtime is the same as when the filename is N.ooc. Could you let me know if N in N.ooc has to be the tile size? -- Regards, Peng _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
