On 8/19/10 10:30 AM, Davide Cittaro wrote: > > On Aug 19, 2010, at 4:27 PM, Duke wrote: > >> On 8/19/10 10:16 AM, Davide Cittaro wrote: >>> >>> On Aug 19, 2010, at 3:52 PM, Duke wrote: >>> >>>> Hi all, >>>> >>>> Anyone knows an option added to the added track so that the default >>>> setting of /Windowing function/ for that track will be mean instead of >>>> mean+whiskers? >>>> >>> >>> track type=bigWig windowingFunction=mean bigDataUrl=… >> >> That works. Thanks David. > > The same for bigBed (i.e. visibility=squish)
Well, it is not quite "same" as you said: *Display mode: * Type of graph: Track height: pixels (range: 11 to 128) Vertical viewing range: min: max: (range: 0.005 to 57989.3) Data view scaling: Always include zero: Transform function: Transform data points by: Windowing function: Smoothing window: pixels *Draw y indicator lines:* at y = 0.0: at y = Graph configuration help <../goldenPath/help/hgWiggleTrackHelp.html> The Windowing function is set by windowingFunction, but the Display mode is set by (as you mentioned) visibility. It is not ovious and I wish there is a list of such commands. D. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
