Hi, I have a genomic region of interest, and I want to extract all the exon coordinates for sequence capture. The annotation database I want to use is the UCSC Known Genes database.
However, it seems to me that the Known Genes database contains splice variants for several genes. I just want the start and stop coordinates of all exons (both coding and non-coding, and both known and novel) within my region of interest, without any duplicated exons. Any idea on how this can be done? Thanks, Joses _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
