Hello Katerina, More information on any of our tracks is available by clicking on the track name in the main Genome Browser display page (http://genome.ucsc.edu/cgi-bin/hgTracks). For the 14-way insect alignment, navigate to the D. melanogaster Apr. 2006 (dm3) browser. In the "Comparative Genomics" section, click on the "Conservation" track to get detailed information about the 14-way insect alignment. If you are interested in details of the pairwise alignments used to make the 14-way alignment, you can click on the individual "net" and "chain" tracks.
I hope this answers your question. If not, please feel free to contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group Katerina Kechris wrote: > Dear Genome Browser, > > For some of your alignments, I am interested in the cutoffs you used to > perform the alignment and if you have thresholds for determining what is > 'alignable'. > > Do you have references available for the alignments that give this > information? I was able to find a reference for the 27-vertebrate > alignment, but how about the the 14 insect alignment? > > Thanks, > Katerina > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
