Hello Manisha,

I replied to your email on December 23rd, but it looks like the email 
did not reach you.  My original reply is here:

http://www.soe.ucsc.edu/pipermail/genome/2008-December/017853.html

--
Brooke Rhead
UCSC Genome Bioinformatics Group


On 12/30/08 11:38, Manisha Brahmachary wrote:
> Hello,
> 
>  
> 
> I am not sure if this email reached you. I am resending it with my queries.
> 
>  
> 
> From: Manisha Brahmachary 
> Sent: Tuesday, December 23, 2008 1:54 PM
> To: [email protected]
> Subject: genomic coordinates, 3'UTR query
> 
>  
> 
> Hello,
> 
>  
> 
> I have two different queries. I hope it is ok to put queries in the same
> email.
> 
>  
> 
> 1.    Is there any flat file other than RefFlat and RefGene for human which
> gives me the genomic location (chromosome, Transcription start and end) of
> each known gene and maybe ESTs (optional). I find the coverage of RefFlat not
> that good hence I am looking for an alternative.
> 2.    Is there any fasta sequence file available for 3'UTR sequences for
> the whole genome (human)?
> 
>  
> 
> Thanks
> 
> Manisha Brahmachary
> 
> Bioinformatician
> 
> Columbia university
> 
>  
> 
> _______________________________________________
> Genome maillist  -  [email protected]
> http://www.soe.ucsc.edu/mailman/listinfo/genome
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