Hello Could somebody describe the internal format of *.over.chain files used by liftOver?
For example such file can contain following lines: ##matrix=axtChain 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91 chain 17776980940 chr1 195109612 + 3000000 195109612 chr1 194923535 + 3036540 194923535 1 4858 6 0 215772 0 1 141108 2 0 504 1 0 197 1 0 1993 1 0 36 100 7 10455 0 1 1310 107 59 ... Thank you very much Kirill _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
