Thanks a lot.:)
Brooke Rhead wrote: > Hello Xianjun, > > The Human Proteins track for medaka (oryLat2) is now available on the > main UCSC Genome Browser site. > > -- > Brooke Rhead > UCSC Genome Bioinformatics Group > > On 02/02/09 16:51, Jennifer Jackson wrote: >> Hi Xianjun , >> >> Recently, the medaka genome was updated to a newer version. The data >> track you mention has not been through our QA release process yet, >> but when it is released we will send you an email. >> >> Meanwhile, you can access both the previous release oryLat1 and the >> new release oryLat2 on our test server. Both are annotated, but be >> aware that some of these annotation tracks have not gone through QA >> yet (or may never go through QA). >> http://genome-test.cse.ucsc.edu/ >> >> We removed oryLat1 from the main browser because of some data >> problems. We documented the problem in the oryLat1 downloads README >> file: >> http://hgwdev.cse.ucsc.edu/goldenPath/oryLat1/bigZips/ >>> ERROR NOTE: We have determined that UCSC's assembly of the chrUn >>> sequence for oryLat1 is incorrect: the gap relationships between >>> contigs within their ultracontigs are broken. We are in the process >>> of correcting this error, and plan to post a corrected data set in >>> late July. We apologize for the inconvenience. >> We hope this helps to clear things up, >> UCSC Genome Bioinformatics Group >> >> Jennifer Jackson >> >> >>> Xianjun Dong Xianjun.Dong at bccs.uib.no >>> Mon Feb 2 02:24:32 PST 2009 >>> >>> Hi, >>> >>> There was "Human Proteins Mapped by Chained tBLASTn" track in medaka >>> genome, but it's not there now. I am wandering if it's because of >>> the wrong data or you missed to put there. It is a quite often used >>> track, at least for the incompletely annotated medaka genome. >>> >>> Regards, >>> >>> Xianjun >>> >>> >>> >> _______________________________________________ >> Genome maillist - [email protected] >> http://www.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
