Good Evening Jeremy: What genome assembly are you looking at ?
At the gateway page: http://genome.ucsc.edu/cgi-bin/hgGateway After you have selected the genome assembly of interest, note the "sequences" link in the first line at the beginning of the description. That will take you to a list of chromosomes for that assembly. For example, Human Mar 2006/Hg18: http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg18&chromInfoPage= If the is a chrUn listed there (which there is not for this hg18 genome assembly) click on its name and the browser will open up on chrUn. You can also enter "chrUn" in the position/search entry box of the genome browser. If the genome assembly has no chrUn it will not be found. See also: http://genome.ucsc.edu/FAQ/FAQdownloads#download10 --Hiram Jeremy Ellis wrote: > Hello all. > > I admit that I am probably not investing a sufficient amount of time > figuring out exactly how to compile and view the contig sequence > information, however I hope that someone might be able to give me a > short cut for this request. > > Simply, all I want is the complete sequence for Chr Un (the unplaced > sequence "Chromosome"). I've tried to get the Genome Browser to > display Chr Un:217332100-217332038 and other such intervals with no > dice. I've downloaded the sequence files multiple times, but I can't > seem to find any file for the Chr Un. > > I'm quite sure that this has been asked for multiple times, but alas > I am a new comer and this really isn't my area of expertise. I thank > you in advance for any information. > > J. _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
