Hello Aaron, These data are not in the UCSC Genes track. Instead, use the tables associated with the RefSeq track.
The UCSC Genes track processing is complicated and the team is working on determining the scope and any long-term solutions. Thank you for bringing our attention to the discrepancy and for providing examples. We are sorry for any inconvenience. Thanks again, Jennifer Jackson UCSC Genome Bioinformatics Group Aaron Gabow wrote: > Hi, > > I'm a little confused by some protAcc ids that I assumed would be in the > kgXref table but are not. I downloaded the current human, Mar. 2006 > assembly, UCSC Genes, kgXref table and noticed that some protein > accession ids such as NP_003330 and NP_002735 do not appear to be in the > table. However, some of these missing terms appear in older builds, > like NP_003330 is int he May, 2004 build. Looking at their NCBI entries, > I can't figure out why they are missing. > > If I search the genome browser for these terms, the browser finds them, > so they must be in some table, but I don't know which one. > > Any insight would be appreciated, > Aaron > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
