Hello, You are correct, the data is not stored in the database, but generated by the Browser cgi.
This is a previous answer that explains how to use the UCSC Browser source tools/data to generate Short Match alignment coordinates: https://lists.soe.ucsc.edu/pipermail/genome/2006-May/010707.html Thank you, Jennifer Jackson UCSC Genome Bioinformatics Group Tim Hefferon wrote: > Hi, > > Short Match is an extremely useful tool. But I cannot find a way to > save the data once I enter a sequence to match, because the Short > Match track is not available in the Table Browser. I type in a > sequence, e.g. 'AGCTTAG', the browser shows me all the hits, but I > cannot save it! The usefulness of Short Match is nearly completely > negated by its lack of availability in the Table Browser. > > Any thoughts? > > Thank you, > Tim Hefferon > > > Timothy Hefferon, PhD > Postdoctoral Fellow > Genome Technology Branch > National Human Genome Research Institute > National Institutes of Health > 50 South Dr., Rm. 5527 > Bethesda, MD 20892 > tel: (301) 594-9129 > fax: (301) 496-0474 > [email protected] > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
