Hello UCSC genome help, I was unable to find information regarding what the colors represent on the ESTs of a gene. Would you kindly explain to me what they represent?
Also, is it possible to create a splice variant form off analyzing the ESTs one by one? Or have the software already done that for us? For example, NM_001011649.1 and NM_018249.4, are the only Refseqs for cdk5rap2. I am wondering if another alternatively spliced transcripts exist for cdk5rap2. Is there an algorithm that UCSC uses to identify the Refseqs based on the ESTs that are on the database? Or is there an alternative method the UCSC used to identify the above transcripts? I would like to know this information because my supervisor wants me to individually look at the ESTs that appear to be different from the NM_001011649.1 and NM_018249.4 transcripts. I would be very grateful for your assistance, hence, this would save me a lot of time. Thank you. Regards, Paul Lee _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
