I am making genome-wide figures using the Genome Graphs tool of the UCSC 
browser. This looks and works great.

However, as I have a number of these to make, I'd like to try to automate the 
process.

I downloaded the hgGenome cgi-bin binary via instructions at 
http://genome.ucsc.edu/admin/jk-install.html, but I'm not sure what arguments 
it takes, or if I can use it as a command-line tool to automate making figures.

Is anyone familiar with hgGenome or its use on the command line?

Thanks,
Alex
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