Hi Pravin, The SNPs in our tables do not include ALL SNPs found at dbSNP. An explanation of what is excluded from our tables is in this previously-answered question:
https://lists.soe.ucsc.edu/pipermail/genome/2010-October/023817.html That said, if you are looking to download our entire snp130 table, you can do so from our downloads server via http or ftp (for ftp instructions, see: http://genome.ucsc.edu/FAQ/FAQdownloads.html#download1). Assuming you want the SNPs for the hg18 assembly (NCBI build 36), here is how you would find the file from the website: Home -> Downloads -> Human -> (scroll to hg18) -> Annotation database -> look for the snp130.txt.gz file. The complete http path to it is: http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/snp130.txt.gz If you have further questions, please feel free to contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 10/24/10 21:59, PRAVIN wrote: > Hello, > How could i get complete validated SNPs of build 130 (flat file) using > Tables at the website? > Regards, _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
