Please note the message you receive when you extract wiggle data with the table browser, for example
> # This data has been compressed with a minor loss in resolution. > # (Worst case: 0.78125) Please note the discussion of this data type and the loss of resolution in the data when it is in a wiggle table in the second paragraph here: http://genome.ucsc.edu/goldenPath/help/wiggle.html --Hiram [email protected] wrote: > Dear Genome Bioinformatics Group, > I downloaded the 'phyloP44wayPrimate' database from UCSC > (http://hgdownload.cse.ucsc.edu/goldenPath/hg18/phyloP44way/primates) > at Mar. 2010. I found many values, for the exactly same position, are > inconsistent with those retrieved using 'Table Browser. I'm using the > same genome assembly and the inconsistence is not like a mathematical > approach. Taking region chr1:867477-867494 for example, the > differences are notable at many positions. > Look forward to your kindly explanation. Thank you! > > The values from local database were: > 867477 0.531 > 867478 0.511 > 867479 0.531 ... _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
