Good Afternoon Saba: Thank you for pointing out this error. I note the correctly lower case masked files are in the file: chromFaMasked.tar.gz
However, that file should have contained all the masked sequence as N's We will have to fix these files. --Hiram Saba Sajjadian wrote: > Hi, > > I have a question about chromFa.tar.gz for monDom5. As mentioned in > README it should have repeats shown in lower case. However; it does not > contains any lower case and all the sequence is shown in upper case. Am > I missing something here? Should I use chromOut.tar.gz and change the > repeats to lowercase myself? > > Thanks > Saba Sajjadian _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
