Hi Justin, This is a known limitation of bigBED tracks and is currently on our list of features to add to the Genome Browser.
Please feel free to contact the mail list again if you have any other questions. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 11/21/10 2:20 PM, Choi, Jeong-Hyeon Justin wrote: > The color in dense and squish modes is different for a bigbed file. For > example, with the track line > track visibility=dense db=hg18 type=bigBed name="bed" > bigDataUrl=http:.../aaa.bigbed itemRgb=On, the following is shown in the > black in the dense mode and in the red in the other modes. > chr10 83255 83257 0.800 5 + 83255 83257 255,0,0 > > How can it be shown in the red in the dense mode? > > Thanks, > Justin. > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
