Can you try adding -m64 to the CFLAGS in src/inc/common.mk and see if that instructs the compiler to create 64 bit binaries ?
Clean the source tree when you are ready to build again with -m64 from the ./src/ directory: $ make clean What does it say if you run the 'file' command on the wigToBigWig binary ? --Hiram Johannes Waage wrote: > Dear all, > > I'm having some trouble compiling wigToBigwig for 64 bit on Mac OS X. I > follow the instructions in the Kent Source installation instructions, > including setting MACHTYPE to x86_64. The compiled binary is correctly > output to ~/user/bin/x86_64/wigToBigwig, but upon running this on a mm9 full > phastcon wiggle file (requiring about 20GB of mem), an out of memory error > at 4GB and no indication of wigToBigwig running as a 64 bit executable > suggests that something is wrong.. > > Can anyone point me in the right direction of compiling the tool for 64 bit > on MAC? I'm running 10.6.5 > > Thx in advance, > > Regards, > Johannes W > Uni. of Copenhagen _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
