Hi, Rogier! When you are using the genome position filter with Gene Sorter, please be sure to spell out the entire chromsome name, e.g. "chr12". In addition, you should enter your start and end chrom filter positions without commas in the number.
By the way, I found STX11 on chr6. -Galt 12/13/2010 2:57 PM, R. Kersseboom: > Hi Katrina, > > Sorry for the confusion I sent the email from my girlfriends laptop... > > At the starting page of 'genesorter' I filled in: > genome: human > assembly: hg19 > search: STX11 > Sort by Expression (GNF Atlas2) > Display 50 > > Went on to switch the filter on: > Genome position > chromosome 12 > Start 1 bp > end 55,000,000 bp > > After submitting this query nothing shows up although it should show a few > genes (I checked manually). > > I have tried both firefox and internet explorer as browsers but both gave > the same result. > > Thnx for looking into this issue. > > Rogier Kersseboom > > > > -------------------------- > R. Kersseboom, MD, PhD > > Department of Clinical Genetics > Erasmus MC Rotterdam > Dr. Molewaterplein 50 > 3015 GE Rotterdam > The Netherlands > > Phone: +31 (0)10 7036915 > +31 (0)10 7038380 > Email: [email protected] > > >> Zegt deze email je iets ? Ik snap hier niets van XXX >> >> >> ----- Oorspronkelijk bericht ----- >> Van:Katrina Learned >> Aan:Dominiek Despriet >> Onderwerp:Re: [Genome] (no subject) >> >> >> Hi Dominiek, >> >> Thank you for your email. So that we can better understand the issue, >> would you please provide us with some additional information such as >> what you've entered in the search field and what you have selected as >> the genome, assembly and sort by. Also, please let us know what about >> the displayed is incorrect. >> >> We look forward to hearing back from you so that we can look into this >> matter. >> >> Thank you, >> >> Katrina Learned >> UCSC Genome Bioinformatics Group >> >> Dominiek Despriet wrote, On 12/10/10 13:28: >>> When using gene sorter and selecting genes located on a particular >>> chromosome it doesn't show the correct list. I guess this is a bug in >>> the >>> program >>> >>> >>> >>> Kind regards >>> >>> >>> >>> Rogier Kersseboom >>> >>> _______________________________________________ >>> Genome maillist - [email protected] >>> https://lists.soe.ucsc.edu/mailman/listinfo/genome >>> >> > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
