Hello, I'm having trouble with getting accurate untranslated regions with the table browsing option. I have used two approaches, and have trouble with both. I have used the BED table option, and have picked either 3 or 5 UTR, yet I'm unable to know which gene corresponds to each region (no way to have the symbols). I have also tried to do it manually by using the "selected fields from primary and related tables" output getting the 3' UTR from thick start to cod start and the 5' UTR from thick end to cod end. By doing this, I have found that some of the genes with larger UT regions are not correct and I don't know why. I was wondering if there was any way I could accurately get the UT regions of both the 3' and the 5', and also know which gene it correlates to by indicating the gene symbol.
I don't know if the system has a glitch,because about 95% of the UT regions are correct by the method I'm using, the only ones that are not correct are the ones that are very large. Thank you!! Libia Pava _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
