Hi, we would like to get the nucleotide specific conservation values (e.g., phylo20wayPlacental) for specific genomic regions such as transcripts. We would like to do this locally by making use of some of the UCSC mySQL tables and files.
Is the best way to do this to use a table such as phyloP30wayPlacental and to then go to the *wib files referenced in the "file" field of the table? Is there a ucsc program to convert these files from binary to text-based data? thanks Peter -- PD Dr. med. Peter N. Robinson, MSc. Institut für Medizinische Genetik Charité - Universitätsmedizin Berlin Augustenburger Platz 1 13353 Berlin Germany voice: 49-30-450566042 fax: 49-30-450569915 email: [email protected] http://compbio.charite.de/ http://www.human-phenotype-ontology.org _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
