Good Morning Manisha:

Can you clarify what you mean by multiple WIG files ?
When you say it doesn't work, what error are you receiving ?
Can you use the kent source utilities to construct a bigWig file ?

See also: 
http://genomewiki.ucsc.edu/index.php/Selecting_a_graphing_track_data_format
http://genome.ucsc.edu/goldenPath/help/bigWig.html
http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/

--Hiram

Brahmachary, Manisha wrote:
> Hello,
>
> Is there a way to upload multiple WIG files, each for one chromosome
> together in the custom track? I have tried concatenating all my WIG
> files (1 for each chromosome) into a file (855 kb) and uploading it to
> the custom track but that doesnot seem to work. 
> 
> Thanks
> 
> Manisha
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