See also: http://genomewiki.ucsc.edu/index.php/Coordinate_Transforms
Brian Raney wrote: > We realize that these coordinate systems can be confusing, but using > these systems internally makes it easier to avoid different code for > alignments on the different strands. > > On Thu, Jan 27, 2011 at 2:15 PM, Jaaved Mohammed <[email protected]> wrote: >> Hello, >> >> I am seeing numerous discrepancy between the sequences and coordinates in >> the insect 15-way multiple-alignment files >> (http://hgdownload.cse.ucsc.edu/goldenPath/dm3/multiz15way/) primarily for >> D. ananassae and D. virilus. Hopefully I can explain this as concisely as >> possible, however, let me know how I can clarify: _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
