Hi, I am trying to update our uscs genome browser to the latest in git. When I tried to make lib, I am getting this error:
bamFile.c:816: error: conflicting types for ‘bamOpen’ ../inc/bamFile.h:66: error: previous declaration of ‘bamOpen’ was here cc1: warnings being treated as errors bamFile.c:847: warning: ‘struct samfile_t’ declared inside parameter list bamFile.c:847: warning: its scope is only this definition or declaration, which is probably not what you want bamFile.c:850: error: conflicting types for ‘bamReadNextSamAlignments’ ../inc/bamFile.h:62: error: previous declaration of ‘bamReadNextSamAlignments’ was here make[1]: *** [bamFile.o] Error 1 make[1]: Leaving directory `/gbdb2/src/ucsc_genome_browser/kent/src/hg/lib' make: *** [hgLib] Error 2 Does anyone know what the problem is, am I missing something? I am working on a CentOS 5.5 x86_64 system. Thank you. -- Zhi-Wei Lu Bioinformatics Core Genome Center University of California, Davis (530) 752-2698 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
