On 2 March 2011 13:44, Greg Roe <[email protected]> wrote: > 1) I'm not sure about all of the mystery "tables" you found, but as for the > one example you gave, agilentCgh -- that's the name of a composite track. > So, it's not a table, or a view. You can identify these in trackDb by the > line that says "compsiteTrack on", a couple lines under the track name .
Okay, that makes sense. I've been looking at trackDb through MySQL, and had assumed that the "html" column was purely decorative. For now, I'll just ignore these composite tracks. Have to think a bit first to decide how they would fit into the Savant paradigm. > 2) Hiram commented in this one already. I'll check with him to see if he > came up with anything. Yes, it seems that the files are all available through HTTP, which is perfect. Unfortunately, many of the tracks won't be usable by Savant because we don't have a bigWig parser, but it's certainly a very good start. Thanks for all your help, Eric Smith University of Toronto _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
